Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_05570 |
Symbol | |
ID | 8385895 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 565896 |
End bp | 569025 |
Gene Length | 3130 bp |
Protein Length | |
Translation table | |
GC content | 58% |
IMG OID | 644974654 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TGGTCAAGTT GTGTAGGGCA CACGGTGGAT GTCTTGGCAC CAGGGGCCGA TGAAGGACGT GGGAGGCTGC GATAAGCCTC GGGGAGCTGC CAACCGAGCT GTGATCCGAG GATGTCCGAA TGGGGTAACC CGGCACCCGT GATGGGGTGT CACCCGCCGG TGAATATATA GCCGGTGTGG AGGGAACGCG GGGAAGTGAA ACATCTCAGT ACCCGTAGGA AGAGAAAACA ACCGTGATTC CGTGAGTAGT GGCGAGCGAA AGCGGAAGAG GCTAAACCGT GCACATGGTA AAGCTGTCAG GCGTTGTGTG TGCGGGGTTG TGGGAGCCAC TGTCCAGTAG CTGACACTGC TGGGGATGCC GCGTGTGGTT AGCGGAACCG TCTGGAACGG CGGACCGGAG TGGGTGAGAG TCCCGTACGC GAAAACTGCA TTGTGGTGTC TTAGTGGTTT CCCGAGTAGC AGCGAGCCCG TGGAATTCGC TGTGAATCTG CCGGGACCAC CCGGTAAGCC TAAATACTTC CTGGTGACCG ATAGCGGATC AGTACCGTGA GGGAAAGATG AAAAGTACCC CGGGAGGGGA GTGAAAGAGT ACCTGAAACC GTGTGCCTGC AAGCCGTCAG AGCCTTCGGG TGATGGCGTG CCTTTTGAAG AATGAGCCTG CGAGTTAGTG CTGCGTGGCG AGGTTAACCC GTGTGGGGTA GCCGGAGCGA AAGCGAGTCT GAATAGGGCG TTGAGTCGCG TGGTCTAGAC CCGAAGCGGG GTGATCTACC CATGGCCAGG GTGAAGCGCC GGTAAGACGG CGTGGAGGCC CGAACCCACC AGGGTTGAAA ACCTGGGGGA TGAGCTGTGG GTAGGGGTGA AAGGCCAATC AAACTCCGTG ATAGCTGGTT CTCCCCGAAA TGCATTTAGG TGCAGCGTCG TGTGTTTCAC ACCTGGGGTA GAGCGACTGG ATGGCCTAGG GGGCTTACCG GCTTACCGAA GTCAACCAAA CTCCGAATAC AGGTGTGTGA GAGCACGGCA GTGAGACGGC GGGGGATAAG CTTCGTCGTC GAGAGGGAAA CAGCCCAGAA CACCAGCTAA GGCCCCTAAG TGTGTGCTCA GTGGGAAAGG ATGTGGAGTC GCTGAGACAA CCAGGAGGTT GGCTTAGAAG CAGCCATCCT TGAAAGAGTG CGTAATAGCT CACTGGTCGA GTGGTTCTGC GCCGATAATG TAGCGGGGCT AAGCACACCG CCGAAGCTGT GTCATTCACA CAGGTGATCG GCCCTGGTCC TTCGGGGTTG GGGTCCAGTC GTGTGGATGG GTAGGGGAGC GTCCTGTACC CATAGAAGCC GTCGGGTGAC CGAGCGGTGG AGGGTGCGGG AGTGAGAATG CAGGCATGAG TAGCGAAAGC AGAGTGAGAA TCTCTGCCGC CGGATGACCA AGGGTTCCTG GGCCAGGTTG TTCCGCCCAG GGTAAGTCGG GACCTAAGGC GAGGCCGTCA GGCGTAGTCG ATGGACAACG GGTTGATATT CCCGTACCCG CGTGTGCGCG TCCCTGGCGA GGCAGGTGAG ACTAACCACC CGCTCTGCGC GTACTCCTTC GGGAGTGTGT GTGGGGTGCG TGGGACCTGA TCCTGTAGTA GCCAAGCGAT GGGGTGACGC AGGAAGGTAG CCCCGCCAGT CAGTGGTGAT ACTGGTGTAA GCGTGTGGCC CGTCCGATAG GCAAATCCGT CGGACTGTCC TTCGAGGACA AGGGTGAGGC GTGATGCATA GCCGTTGAGG CGAAGTAGGG TGATCCTCTG CTGCCGAGAA AAGCCTCTAG CGAGTGCGCA CGTGGCCCGT ACCCGAAACC GACACAGGTG GTCAGGTAGA GAATACCAAG GCGATCGGGT GAACTGTGGT TAAGGAACTC GGCAAATTGC CCCCGTAACT TTGGGAGAAG GGGGGCCAAA GCGCCTGAAG CCCCTTGCGG GCTAGGGCGA GTTGGCCGCA GAGACCAGCG GAAAGCGACT GTTTACTAAA AACACAGGTC CATGCGAAGA CGTAAGTCGA TGTATATGGA CTGACGCCTG CCCGGTGCTG GAACGTTAAG AGGACCGGTT AGCCCCCTTT CGGGGGGGTG AAGCCGAGAA TTTAAGCGCC AGTAAACGGC GGTGGTAACT ATAACCATCC TAAGGTAGCG AAATTCCTTG TCGGGTAAGT TCCGACCTGC ACGAATGGCG TAACGACTTT CCGGCTGTCT CAACCACAGG CCCGGCGAAA TTGCACTACG AGTAAAGATG CTCGTTTCGC GCGGCAGGAC GGAAAGACCC CGGGACCTTT ACTACAGCTT GGTATTGGTT CTCGGTTCGG CTTGTGTAGG ATAGGTGGGA GACTGGGAAG CCCGCACGCC AGTGTGGGTG GAGTCGCCGT TGAAATACCA CTCTGGCCGG ATTGGGAATC TAACCTCGGA CCGTGATCCG GTTCAGGGAC AGTGCCTGGT GGGTAGTTTA ACTGGGGCGG TTGCCTCCTA AAAGGTAACG GAGGCGCCCA AAGGTTCCCT CAGCCTGGTT GGCAATCAGG TGTCGAGTGT AAGTGCACAA GGGAGCTTGA CTGTGAGACC GACGGGTCGA GCAGGGACGA AAGTCGGGAC TAGTGATCCG GCACCACCTG GTGGAAGGGG TGTCGCTCAA CGGATAAAAG GTACCCCGGG GATAACAGGC TGATCTTGCC CAAGAGTCCA TATCGACGGC ATGGTTTGGC ACCTCGATGT CGGCTCGTCG CATCCTGGGG CCGGAGTAGG TCCCAAGGGT TGGGCTGTTC GCCCATTAAA GCGGCACGCG AGCTGGGTTT AGAACGTCGT GAGACAGTTC GGTCCCTATC CGCCGCGCGC GTTGGAGACT TGAGGAAAGC TGTCCCTAGT ACGAGAGGAC CGGGACGGAC GAACCTCTGG TATGCCAGTT GTCCCGCCAG GGGCATGGCT GGTTAGCTAC GTTCGGAAAG GATAACCGCT GAAGGCATCT AAGCGGGAAG CCTGTTCCAA GATGAGGTCT CCCACCACCT TCGAGTGGGT AAGGCCCCCC AGAGATGATG GGGTTGATAG GCCAGACATG GAAGCGCAGC AATGCGTGCT GGAGTGGACT GGTACTAATC GGCCGAGGGC TTGACCACAA
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Protein sequence | |
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