| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_04890 |
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| Symbol | |
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| ID | 8385827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 482137 |
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| End bp | 484590 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974587 |
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| Product | ATP-dependent DNA helicase PcrA |
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| Protein accession | YP_003132391 |
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| Protein GI | 257054559 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC TGTTCGATCT TCCCCCGGAA TCCGCAGGCG GCGGCGTTTC GCACGGGCCG
CTGCTCGATG ACCTGAATCC CGCCCAGCGC GCGGCGGTGG AGCATCAGGG CCGCCCCCTG
CTCATCGTCG CGGGCGCGGG CTCGGGTAAG ACCCGCGTGC TCACCAGGCG AATCGCCTAT
CTGCTCGCGG CCAGGGGGGT GCATCCCGGC CAGATCATGG CCATCACGTT CACCAACAAG
GCCGCGGCCG AGATGCGCGA CCGCGTGGTC GACCTCGTCG GAGGGCGTGC GGGCGCGATG
TGGGTGTCGA CGTTTCACTC GATGTGCGTA CGCCTGCTGC GGCGCGAGGC GAAGACACTG
GAGCTGACGT CGAACTTCTC CATCTACGAC GCGGACGACA GCAGGCGGCT GATGGCGTTG
GTCGGGCGTG ATCTGGAGCT CGACCCGAAG CGGTACTCGG CACGCGCGCT CGCCAACCAC
GTGTCCAACC TGAAAAACGA GCTCATCGAC CCCGACGCGG CGGCGGACGC GGCGGCGAAC
GACTTCGAAC GTAGGGCCGC CGAGGCGTAT CGCGAGTACC AGAACAGGCT GGCGCAGGCC
AACGCCCTGG ACTTCGACGA CCTCATCGCG AGGACGGTGG AGCTGTTCCA GGCCTTCCCC
GATGTGGCCG AGCACTACCG GCGCCGGTTC CGGCACGTCC TCGTCGACGA GTACCAGGAC
ACCAACCACG CGCAATACAC CCTGATCAGG GAGTTGGTCG GGACCGGTCC GACCGAGTCC
GGACTGCCCC CGTCGGAACT GTGCGTCGTC GGTGACGCCG ACCAATCGAT CTACGCGTTC
CGTGGGGCCA CCATCCGCAA CATCGAGGAG TTCGAACGCG ACTTCCCCGA CGCGCGCACC
ATCCTGCTGG AGCAGAACTA CCGCTCGACG CAGACGATCC TGTCCGCGGC CAACGCCGTC
ATCTCCCGAA ACCCCGGGCG CAGGGAGAAA CGTCTGTGGA CCGACGCGGG CCAGGGGGAA
CGCATCGTCG GTTATGTGGC CGACAGCGAA CACGACGAGG CGGCGTTCGT GGCCGAGGAG
ATCGACGCGC TGGTCGACCG GGGCGAGGCG AAGTACTCCG ACGTGGCCGT GTTCTACCGC
ACCAACAACC AGTCCCGGGT GTTCGAGGAG ATCTTCATCC GGCTCGGCCT GCCGTATCGG
GTCGTCGGCG GGGTGCGGTT CTACGAGCGC AAGGAGGTCA AGGACGCGCT CGCGTACCTG
CGGGTGCTGG CCAACCCCGA GGACACCGTG AGCCTGCGGC GCATCCTCAA CGTGCCGAAA
CGGGGCATCG GCGAGCGTGC CGAGGCCGTG GTGGCCACCC ACGCCGAGCG GGAGCGCATC
TCGTTCGCGT CGGCGTTGCG CGACGCCGTC GCGGGGCGGA TCCCGCTGCT GAACCCTCGT
TCGCAGAAGG CCATCACCGC GTTCGTGGAG CTGATCGACG GACTGCGGGA ACTCGTGGAC
GAGGGCACGG ACGTCGCCGA CGTCCTGGAG GCGGTGCTCG ACCGCACCGG TTATCGCGCC
GAACTGGAGG GTTCGGACGA CCCGCAGGAC GCCTCGCGGT TGGAGAACCT GGACGAGCTC
GTCACGGTGG CACGTGAGTT CACCGAGTTC GCCCGGTCGG TAGGGGAGGA CACGGGTACG
AGCGAGGACA CCGACGTCGC CACCGACTTC GAGGACGCTG ATGTCGCCGA GCCGGGATCG
CTGTCGGCGT TTCTGGAACG GGTGTCGTTG GTGGCCGACG CCGATTCGGT CCCGTCCCCC
GACGGCGAGG GAGCCGACGA GGCCGACGAG GACGGTGTGG TCACCCTGAT GACGGTGCAC
ACGGCCAAGG GGCTCGAGTA CCCGGTGGTG TTCTGCACCG GCTGGGAGGA CGGCGTGTTC
CCCCATCTGC GGGCGCTGGG CGAGCCGAAG GAGTTGGCGG AGGAACGCAG GCTGGCTTAC
GTGGCGATCA CCCGGGCGCA ACGGCGGCTG TACGTTTCCC GTGCGTTGGT GCGCAATGCC
TGGGGACAGC CGATGAGCAA CCCGGCGTCG AGGTTCCTCG ACGAGATCCC CGCCGAACTC
GTCGACTGGC GGAGGCTGGC CCCGTCGGGT ACTCAGCGGG AGACGGGGAC ACCCCGCGCG
GTCACGACGT GGGGTCGTGG GGTCGGCACC GGGGTCACCT CGAGCGGTGT GCGTACGACG
TCGTTCCAAG CGGCGTCCCG CGGGGCCCGG AGCTCCCGCC CGAACGAGAG CTGGAAGAAC
AAGGTGCCGC TCAAGCTCGA CGTGGGTGAT CGGGTCAACC ACGACAAGTA CGGGCTGGGC
ACGGTGGTGG CCACGGAGGG GGTGGGTCCG CGGACCACGG CCACCATCGA TTTCGGCAGT
GCCGGCACCG TGCGGCTCAT GCTGATCGGC AATGTGCCGA TGGTGAAGCT CTAG
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| Protein sequence | MSTLFDLPPE SAGGGVSHGP LLDDLNPAQR AAVEHQGRPL LIVAGAGSGK TRVLTRRIAY
LLAARGVHPG QIMAITFTNK AAAEMRDRVV DLVGGRAGAM WVSTFHSMCV RLLRREAKTL
ELTSNFSIYD ADDSRRLMAL VGRDLELDPK RYSARALANH VSNLKNELID PDAAADAAAN
DFERRAAEAY REYQNRLAQA NALDFDDLIA RTVELFQAFP DVAEHYRRRF RHVLVDEYQD
TNHAQYTLIR ELVGTGPTES GLPPSELCVV GDADQSIYAF RGATIRNIEE FERDFPDART
ILLEQNYRST QTILSAANAV ISRNPGRREK RLWTDAGQGE RIVGYVADSE HDEAAFVAEE
IDALVDRGEA KYSDVAVFYR TNNQSRVFEE IFIRLGLPYR VVGGVRFYER KEVKDALAYL
RVLANPEDTV SLRRILNVPK RGIGERAEAV VATHAERERI SFASALRDAV AGRIPLLNPR
SQKAITAFVE LIDGLRELVD EGTDVADVLE AVLDRTGYRA ELEGSDDPQD ASRLENLDEL
VTVAREFTEF ARSVGEDTGT SEDTDVATDF EDADVAEPGS LSAFLERVSL VADADSVPSP
DGEGADEADE DGVVTLMTVH TAKGLEYPVV FCTGWEDGVF PHLRALGEPK ELAEERRLAY
VAITRAQRRL YVSRALVRNA WGQPMSNPAS RFLDEIPAEL VDWRRLAPSG TQRETGTPRA
VTTWGRGVGT GVTSSGVRTT SFQAASRGAR SSRPNESWKN KVPLKLDVGD RVNHDKYGLG
TVVATEGVGP RTTATIDFGS AGTVRLMLIG NVPMVKL
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