Gene Svir_04300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04300 
Symbol 
ID8385768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp416282 
End bp417241 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content56% 
IMG OID644974529 
Producthypothetical protein 
Protein accessionYP_003132333 
Protein GI257054501 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.169884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA CAGTGAACCT CAATGATGTA TTTCGTGGCT CTGCCGCACG AGCAGCCGGC 
TATGTGACCG AAGCAGAATT GCGTGGACCG AGGTTCCGCA GACTTTTCCA AGACGTCTAC
GCACCCGCGC ACCTTCCCGT CACCCATGAA CTCCGGTGCC GCGGCGCCGC ATTGATCGTA
CCCAAGCAAG CGGTACTGAC AGGGCGTTCA GCTGCCACAG TACTCGGCGT CGAACTCGCC
AAACCATATG ATCCAGTGGA ATTCGTTGTT CCCGAGCAGT ACCGTTTCGG CCCTATCCAA
GGAATCCATG TTCGCCGCAC AGCCATCAGG ACAACGGAAT CACGCCCTTG GAACGGTATC
CGCATTGCAC GACCCTGGCG AGCGGCTCTG GACCTGATAC TGCGCCTCTC ACCGCGAACT
TACAGCTGGG TGCGAAGGCT GCGCATCGCA GTACCCGATG TTGATGCCTT CATACGCGCT
GGACTGGTCA CGCCACAACG TCTGCGATGC GCCCTGAGAG GACGCCGAAA TCGCGGAATA
AGACTGGCAC GTGCCGCGCT GTCGATGATC GATCCTCGCG CAGAATCACT TCCCGAATCA
GAACTCCGCG TAGTCCTCAA AAGTGGGGGA TTCGAACCGA TACCCCAATA CCCCATCATG
AAAAATGGTC GAGAAGTAGC CAGACTGGAT CTTGTTCTTC CAGAAACGAA GACAGCGATT
GAATACGATG GAAAATGGCA CCGAAAGCGC AAGCAGGCGC GCCTAGATAA AGCAAGAAGA
AAGAAGCTGA TGGGCGAAGG TTGGTACTTT GTCATCGTCA CTGCCGAAAA ATTGGCAGGC
GATTACACTA AAATCCTGCG GGAGGTACGC GAAGCTCAGT CACTTTGGAA GGATTCGGAC
TCGTCACGGA TGTTGCGCGT CTTCTCCGCA CGTGACGCGA GCTCGTCGTC CGGCGGGTAG
 
Protein sequence
MNTTVNLNDV FRGSAARAAG YVTEAELRGP RFRRLFQDVY APAHLPVTHE LRCRGAALIV 
PKQAVLTGRS AATVLGVELA KPYDPVEFVV PEQYRFGPIQ GIHVRRTAIR TTESRPWNGI
RIARPWRAAL DLILRLSPRT YSWVRRLRIA VPDVDAFIRA GLVTPQRLRC ALRGRRNRGI
RLARAALSMI DPRAESLPES ELRVVLKSGG FEPIPQYPIM KNGREVARLD LVLPETKTAI
EYDGKWHRKR KQARLDKARR KKLMGEGWYF VIVTAEKLAG DYTKILREVR EAQSLWKDSD
SSRMLRVFSA RDASSSSGG