Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_04300 |
Symbol | |
ID | 8385768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 416282 |
End bp | 417241 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644974529 |
Product | hypothetical protein |
Protein accession | YP_003132333 |
Protein GI | 257054501 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.169884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCA CAGTGAACCT CAATGATGTA TTTCGTGGCT CTGCCGCACG AGCAGCCGGC TATGTGACCG AAGCAGAATT GCGTGGACCG AGGTTCCGCA GACTTTTCCA AGACGTCTAC GCACCCGCGC ACCTTCCCGT CACCCATGAA CTCCGGTGCC GCGGCGCCGC ATTGATCGTA CCCAAGCAAG CGGTACTGAC AGGGCGTTCA GCTGCCACAG TACTCGGCGT CGAACTCGCC AAACCATATG ATCCAGTGGA ATTCGTTGTT CCCGAGCAGT ACCGTTTCGG CCCTATCCAA GGAATCCATG TTCGCCGCAC AGCCATCAGG ACAACGGAAT CACGCCCTTG GAACGGTATC CGCATTGCAC GACCCTGGCG AGCGGCTCTG GACCTGATAC TGCGCCTCTC ACCGCGAACT TACAGCTGGG TGCGAAGGCT GCGCATCGCA GTACCCGATG TTGATGCCTT CATACGCGCT GGACTGGTCA CGCCACAACG TCTGCGATGC GCCCTGAGAG GACGCCGAAA TCGCGGAATA AGACTGGCAC GTGCCGCGCT GTCGATGATC GATCCTCGCG CAGAATCACT TCCCGAATCA GAACTCCGCG TAGTCCTCAA AAGTGGGGGA TTCGAACCGA TACCCCAATA CCCCATCATG AAAAATGGTC GAGAAGTAGC CAGACTGGAT CTTGTTCTTC CAGAAACGAA GACAGCGATT GAATACGATG GAAAATGGCA CCGAAAGCGC AAGCAGGCGC GCCTAGATAA AGCAAGAAGA AAGAAGCTGA TGGGCGAAGG TTGGTACTTT GTCATCGTCA CTGCCGAAAA ATTGGCAGGC GATTACACTA AAATCCTGCG GGAGGTACGC GAAGCTCAGT CACTTTGGAA GGATTCGGAC TCGTCACGGA TGTTGCGCGT CTTCTCCGCA CGTGACGCGA GCTCGTCGTC CGGCGGGTAG
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Protein sequence | MNTTVNLNDV FRGSAARAAG YVTEAELRGP RFRRLFQDVY APAHLPVTHE LRCRGAALIV PKQAVLTGRS AATVLGVELA KPYDPVEFVV PEQYRFGPIQ GIHVRRTAIR TTESRPWNGI RIARPWRAAL DLILRLSPRT YSWVRRLRIA VPDVDAFIRA GLVTPQRLRC ALRGRRNRGI RLARAALSMI DPRAESLPES ELRVVLKSGG FEPIPQYPIM KNGREVARLD LVLPETKTAI EYDGKWHRKR KQARLDKARR KKLMGEGWYF VIVTAEKLAG DYTKILREVR EAQSLWKDSD SSRMLRVFSA RDASSSSGG
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