| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_04270 |
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| Symbol | |
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| ID | 8385765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 413769 |
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| End bp | 414845 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644974526 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_003132330 |
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| Protein GI | 257054498 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0878325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGATTT CCCAGCGGCC GACCCTCAGC GAGGAGACGG TCAACGAGAC GCGCTCACGG
TTCACCATCG AGCCGCTCGA GCCTGGCTTC GGTTACACCT TGGGCAACTC GCTGCGGCGG
ACCCTGTTGT CGTCCATTCC GGGTGCCGCG GTCACGAGCA TCCGTATCGA CGGCGTGCTG
CACGAGTTCT CCACCGTTCC CGGGGTGAAG GAAGACGTCA CCGAGATCAT CCTGAACCTC
AAGGAACTCG TCGTCTCCTC TGAAGAGGAT GAGCCCGTCA CGATGTACCT GCGCAAGCAG
GGTCCCGGCG AGGTCACCGC TGCCGACATC GTGCCGCCGT CCGGCGTCAC CGTGCACAAC
CCGGATCTGC ACATCGCGTC GTTGAACGGC AAGGGCAAGC TCGAGATCGA GCTGGTCGTC
GAACGCGGCC GCGGTTATGT GCCCGCGCTT CAGAACAAGC AGGCTGGCGC GGAGATCGGG
CGGATTCCGA TCGACTCGAT CTACTCGCCG GTGCTCAAGG TGACCTACAA GGTCGAGGCG
ACCCGTGTCG AGCAGCGCAC CGACTTCGAC AAGTTGGTGC TCGACGTGGA GACCAAGCCG
TCGATCACCC CGAGGGACGC TGTCGCCTCG GCGGGTAAGA CGTTGGTCGA GCTGTTCGGT
CTCGCGCGCG AGCTGAACGT TGATGCCGAA GGCATTGAGA TCGGTCCGTC GCCGCAAGAG
GCTGACACCA TCGCCGCCTA CGCGATGCCG ATCGAGGACC TCGACCTGAC GGTGCGGTCG
TACAACTGCC TGAAGCGTGA GGGAATCCAC ACGGTTGGCG AGCTGGTGTC CCGGAGTGAG
GCCGACCTGC TCGACATCCG TAACTTCGGC GCTAAGTCGA TAGACGAGGT GAAGATGAAG
CTCGCCGGTC TCGGCTTGAC GCTGAAGGAC AGCCCGCCTG GATTCGACCC CACGGCTGCT
GCCTCCACCT ACGGTGGTGC TGGTACAAGC CAGACCTGGG GTGCGCAGCC CTCGACGGGC
CTTCCGGACA CTGGCCACGA CGACGGCCAG GACTACGCAG AGACGGAGCA GCTGTAA
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| Protein sequence | MLISQRPTLS EETVNETRSR FTIEPLEPGF GYTLGNSLRR TLLSSIPGAA VTSIRIDGVL
HEFSTVPGVK EDVTEIILNL KELVVSSEED EPVTMYLRKQ GPGEVTAADI VPPSGVTVHN
PDLHIASLNG KGKLEIELVV ERGRGYVPAL QNKQAGAEIG RIPIDSIYSP VLKVTYKVEA
TRVEQRTDFD KLVLDVETKP SITPRDAVAS AGKTLVELFG LARELNVDAE GIEIGPSPQE
ADTIAAYAMP IEDLDLTVRS YNCLKREGIH TVGELVSRSE ADLLDIRNFG AKSIDEVKMK
LAGLGLTLKD SPPGFDPTAA ASTYGGAGTS QTWGAQPSTG LPDTGHDDGQ DYAETEQL
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