Gene Svir_04090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04090 
SymbolrplX 
ID8385747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp404287 
End bp404601 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content63% 
IMG OID644974509 
Product50S ribosomal protein L24 
Protein accessionYP_003132313 
Protein GI257054481 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGA AGAAGGGCGA CACGGTCCTC GTCATCGCAG GCAAGGACAA GGGCGCCAAG 
GGCAAGGTGA TCAAGGCCTA TCCGGCACGC CAGCGTGTGC TGGTTGAGGG TGTCAACCGG
ATCAAGAAGC ACACCCGAAT CACCCAGACC CAGCGTGGTG CCCAGTCCGG CGGGATCGTC
ACCCAGGAGG CCCCCATCCA CGTCTCGAAC GTGATGGTCG TCGATTCCGA CGGCAAGCCG
ACCCGGGTGG GCTACCGCAT CGGCGAGGAC GGCAAGAAGG TTCGTATCTC GCGTAGGACG
GGCAAGGACA TCTGA
 
Protein sequence
MKVKKGDTVL VIAGKDKGAK GKVIKAYPAR QRVLVEGVNR IKKHTRITQT QRGAQSGGIV 
TQEAPIHVSN VMVVDSDGKP TRVGYRIGED GKKVRISRRT GKDI