Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_04040 |
Symbol | |
ID | 8385742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 402028 |
End bp | 402888 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974504 |
Product | SSU ribosomal protein S3P |
Protein accession | YP_003132308 |
Protein GI | 257054476 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCCAGA AGATCAACCC GCACGGCTTC CGGCTCGGGA TCACCACGGA CTGGAAGTCC CGCTGGTACG CCGACAAGCA GTACTCGGAG TACGTCGCCG AGGACGTCAA GATCCGTAAG CTCCTGTCCA CCGGGATGGA GCGCGCCGGT ATCTCCAAGG TCGAGATCGA GCGCACCCGG GAACGGGTTC GGGTCGACAT CCACACCGCT CGTCCCGGCA TCGTCATCGG CCGCCGTGGT GCCGAGGCCG ACCGGATCCG GGGAGCCCTG GAGAAGCTCA CCGGCAAGCA GGTGCAGCTG AACATCCTCG AGGTGAAGAA CCCCGAGGCC GATGCTCAGC TCGTGGCTCA GGGCATCGCC GAGCAGCTGT CCAACCGGGT GGCGTTCCGC CGTGCGATGC GTAAGGCGAT CCAGACGTCG ATGCGTTCAC CTCAGGTGAA GGGCATCCGC GTGCAGTGCA GTGGTCGCCT CGGTGGTGCC GAGATGTCGC GCTCCGAGCA CTACCGTGAC GGCCGGGTTC CGCTGCACAC GCTGCGCGCC GACATCGACT ACGGGTTCTT CGAGGCCCGC ACGACGTTCG GTCGCATCGG CGTGAAGGTG TGGATCTACA AGGGCGATCT GATCGGCGGC CTGAAGGCCA AGCAGGAGCG GGAGGCGGCG GCCGCTGCTG AGCGTGCGCC GCGTCGCGAG CGTTCCTCCC GGCGGCGTTC CGGTGCGTCC GGCAACACGT CGTCGTCGAC CGAGTCAAGC CGGGCCACTG CGTCGCAGGG TCAGGGTGGC GCGCAAAGCG ACGCCGACAC CGCGACGAGC CAGGCCCCGC AGGTGGCGGC AACTGACGCC ACAGAGAAAA CGGAGGGCTG A
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Protein sequence | MGQKINPHGF RLGITTDWKS RWYADKQYSE YVAEDVKIRK LLSTGMERAG ISKVEIERTR ERVRVDIHTA RPGIVIGRRG AEADRIRGAL EKLTGKQVQL NILEVKNPEA DAQLVAQGIA EQLSNRVAFR RAMRKAIQTS MRSPQVKGIR VQCSGRLGGA EMSRSEHYRD GRVPLHTLRA DIDYGFFEAR TTFGRIGVKV WIYKGDLIGG LKAKQEREAA AAAERAPRRE RSSRRRSGAS GNTSSSTESS RATASQGQGG AQSDADTATS QAPQVAATDA TEKTEG
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