Gene Svir_03930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03930 
SymbolrpsL 
ID8385731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp393509 
End bp393883 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content63% 
IMG OID644974493 
Product30S ribosomal protein S12 
Protein accessionYP_003132297 
Protein GI257054465 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCACGA TCCAGCAGCT GGTCCGTAAG GGCCGCCAGG ATAAGGCTGC AAAGCAGAAG 
ACGGCGGCGC TCAAGGGGAG CCCGCAGCGT CGTGGTGTGT GCACCCGCGT GTACACGACC
ACGCCCAAGA AGCCGAACTC GGCCCTGCGC AAGGTCGCCC GTGTGAAGCT GAGCAACGGC
ATCGAGGTCA CGGCCTACAT TCCCGGTGAG GGTCACAACC TGCAGGAACA CTCGATGGTG
CTCGTCCGTG GCGGCCGTGT GAAGGACTTG CCGGGTGTTC GCTACAAGAT CGTTCGCGGG
TCCCTTGACA CGCAGGGAGT GAAGAACCGC AAGCAGGCGC GCAGTCGGTA CGGCGCGAAG
AAGGAGAAGA GCTAA
 
Protein sequence
MPTIQQLVRK GRQDKAAKQK TAALKGSPQR RGVCTRVYTT TPKKPNSALR KVARVKLSNG 
IEVTAYIPGE GHNLQEHSMV LVRGGRVKDL PGVRYKIVRG SLDTQGVKNR KQARSRYGAK
KEKS