Gene Svir_03670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03670 
Symbol 
ID8385705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp362928 
End bp363473 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content67% 
IMG OID644974467 
ProductLSU ribosomal protein L10P 
Protein accessionYP_003132271 
Protein GI257054439 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.692531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC CCGACAAGGT GGCGGCCGTC GCCGAGATCG CGGACAAGTT CCGCAACAGC 
TCGGCAGCTG TTGTCACCCA GTACAGTGGC CTCTCCGTGT CCCAGCTCAA TGAGCTGCGT
CGCGCTCTCG GCAACACGGC CAAGTATCGG GTCGCGAAGA ACACCCTCGT CAAGCGTGCG
GCCGCTGAGG CGGGCGTCGA GGGTATCGAC GAGCTGTTCG TCGGTCCGAC CGCGATCGCT
TTCGTGGAAG GCGAGCCGGT CGAGGCGGCG AAGGTGCTGC GTGACTTCGC GAAGGACAAC
AGCGCCCTGG TGATCAAGGG CGGCTACATG GACGGCGCGC CTCTCTCGGT CAGTGAGATC
GAGAAGATCG CCGATCTGGA GAGCCGCGAG GTGCTGCTGG CCAAGGCGGC GGGTGCCATG
AAGGCGAAGC TGTCCCAGGC CGCTGCGCTG TTCCAGGCCC CGGCATCGAA GGTCGCGCGC
CTGAGTGCCG CGCTGGAGGA GAAGCGCAAG TCCGAAGGCG GCGCCGAGCC GGCTGCCGAG
AGCTGA
 
Protein sequence
MAKPDKVAAV AEIADKFRNS SAAVVTQYSG LSVSQLNELR RALGNTAKYR VAKNTLVKRA 
AAEAGVEGID ELFVGPTAIA FVEGEPVEAA KVLRDFAKDN SALVIKGGYM DGAPLSVSEI
EKIADLESRE VLLAKAAGAM KAKLSQAAAL FQAPASKVAR LSAALEEKRK SEGGAEPAAE
S