Gene Svir_03430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_03430 
Symbol 
ID8385681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp342148 
End bp342639 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content63% 
IMG OID644974443 
Producthypothetical protein 
Protein accessionYP_003132251 
Protein GI257054419 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.405869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGATC CCTCTTTCGA CGTCGTGAGC AAGGTCGACC GCCAGGAGGT GGACAACGCG 
CTGAACCAGG CGAACAAGGA GCTGTCCACG CGGTTCGACT TCCGCGGCAC CGGCGCCAAG
ATCGAGTGGT CCGGTGAGCG CGCCGTGGTC ATCGAGGCCG AGACCGAGGA GCGCACGAAG
GCGGCGGTCG AAGTCTTCAA GGAAAAGCTC GTCAAGCGCG GCGTCTCCCT CAAGGCCTTC
GAGGCGGGCG ATCCCGTCGC GTCCGGCAAG GTCTACAAGG TCAACGGCAC GATCAAGGAA
GGCATCGAAG CCGACAAGGC GAAGAAGATC GCCAAATTCA TCCGCGACGA GGGCCCGAAG
GGCGTGCAGG CGCAGATCCA AGGCGATCAA CTCCGGGTGT CGGGCAAGAA GAAGGACCAT
CTCCAGGAGG TCATCTCGAT GCTGAAGAAC CAGGACTTCG GCATCGCCCT GCAGTTCACC
AACTACCGGT GA
 
Protein sequence
MADPSFDVVS KVDRQEVDNA LNQANKELST RFDFRGTGAK IEWSGERAVV IEAETEERTK 
AAVEVFKEKL VKRGVSLKAF EAGDPVASGK VYKVNGTIKE GIEADKAKKI AKFIRDEGPK
GVQAQIQGDQ LRVSGKKKDH LQEVISMLKN QDFGIALQFT NYR