Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_03110 |
Symbol | |
ID | 8385649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 305886 |
End bp | 307565 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644974411 |
Product | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase |
Protein accession | YP_003132219 |
Protein GI | 257054387 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCCCT CCACGGCACA AGCTCGGGTC CTGGTGGACG AGCTCGTCCG CAACACCGTC TCCCACGTGG TGCTGAGCCC CGGCTCCCGT AACGCGCCGC TGTCCTTCGC GCTGCACGAC GCCGCGATGG CCGGCAGGCT CACGCTGCAC GTGCGCATCG ATGAGCGCAG CGCCGCGTTC CTCGCTCTCG GTATCGCCGC GCGTACGGGC CGTCCCGTGG CCTTGGTGTG CACCTCGGGT ACGGCGGCGG CGAATTTCCA CCCCGCCGTG CTGGAGGCGG ACAGGGCGGG GGTGCCGCTG ATCGTGTTGA CGGCCGACCG GCCTCCCGAA CTGCGGGCCG CCGGGGCGAA CCAGGTGATC GACCAGCGTG GGCTCTACGG ACCTGCCGTC CGCTATTTCG ACGAACTGGC CGTGGCCGAA CGCAGGCCGG GACAGAACGC GTACTGGCGC AGTCAGATCT GCCGGGCGTG GAACGCCGCC TACGGGGAGT GGCGGTGTGG TCCCGTGCAC CTCAACATCC CGTTCCGGGA GCCGCTCGTA CCCGACGGAA AGGACGATCC CGACGACTGG CCCGAACCAC TCGACGGCAG ACCGCAGGGT GCACGGTGGA CGGAGTTGCC GGACTTCGGC GCGTTGCCGT CGTCCGTGGT GCCCTCGGCT CGCCACGGTC TGGTGGTGGC GTGCGACGCG GGGGTGCGGG CCGCGGGTGA GTGGGCGGAG TTGCACGGTT GGCCCGTGGT GTCGGAGACG GGGGGTCTCG GACTGGGCGG GACGACGGCG ATCGCGGGCG GCGTGTGGTT GCTGGGGGTG GAGGAGTTCC TGGCCGAACA CAAGCCGGAA CAGGTGTTGT GCATCGGCAG GCCCACGGTG TTCCGGCAGG TGCAGCGGCT GCTGTCCGAT CCGGACATCG AGGTGCTGCT GGTGCGTCCC GACTCCGACT GGCCCGCCCC GGCGCACAAC GTCCGGCAGG TGGGCCAGTG GTTCGACGAA CCGGCGAAAC CGGCCGATCC GGAGTGGTTG TCTCGGTGGC GGGAGGCGGA CGCGGCGGCC GTCGCGGCGG TACGGGAGAC GCTCGCCGAG CAGCCGTGGC CCACCGGGCT GAGCGTGGCG AGCGAGCTGG TGGAGAACCT GCCTCCCGAT TCGCTGTTGG TGGTCGGTTC GTCGAATCCC ACGCGTGACG TCGCGCTCGT CGGCGGCCGT CGCCCCGATG TGTTGGTGCA CCGCAACCGC GGGGTCGCCG GCATCGACGG CACGATCTCC ACCGCCGTGG GCGCGGCCCT GGTGCATTCG GGGCCGGCGT ACGCACTCGT GGGGGATCTG ACGTTCCTAC ACGACGTGAA CGGCCTGCTC GCGGGTCCCA CCGAGAGCAG GCCCGACTTG ACGATCGTGG TGCTCAACGA CGACGGCGGC GGCATCTTCT CGCTGTTGGA ACAGGGGGAG GAACAGCACA GCGCACGGTT CGAACGGGTT TTCGGCACCC CGCACGGTGC GGACCTGTCG GCGTTGTGCG CGGGCTACGG CGTGCCGTAC ACGTTGGCGT CCTCGCGCGA GGTGTTGCGG GAGGCGTTGC GGCCCGCGCC CGGTCTGCGG GTCGTCGAGG TGAGGGTCGA CCGGTCCCGA CACCGCGAGC TGCACGCCCT GCTGCGGGGG GCCGTGGCGA AGGCGATCGA CACCCGTTAG
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Protein sequence | MNPSTAQARV LVDELVRNTV SHVVLSPGSR NAPLSFALHD AAMAGRLTLH VRIDERSAAF LALGIAARTG RPVALVCTSG TAAANFHPAV LEADRAGVPL IVLTADRPPE LRAAGANQVI DQRGLYGPAV RYFDELAVAE RRPGQNAYWR SQICRAWNAA YGEWRCGPVH LNIPFREPLV PDGKDDPDDW PEPLDGRPQG ARWTELPDFG ALPSSVVPSA RHGLVVACDA GVRAAGEWAE LHGWPVVSET GGLGLGGTTA IAGGVWLLGV EEFLAEHKPE QVLCIGRPTV FRQVQRLLSD PDIEVLLVRP DSDWPAPAHN VRQVGQWFDE PAKPADPEWL SRWREADAAA VAAVRETLAE QPWPTGLSVA SELVENLPPD SLLVVGSSNP TRDVALVGGR RPDVLVHRNR GVAGIDGTIS TAVGAALVHS GPAYALVGDL TFLHDVNGLL AGPTESRPDL TIVVLNDDGG GIFSLLEQGE EQHSARFERV FGTPHGADLS ALCAGYGVPY TLASSREVLR EALRPAPGLR VVEVRVDRSR HRELHALLRG AVAKAIDTR
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