Gene Svir_02900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02900 
Symbol 
ID8385628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp289310 
End bp289702 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content68% 
IMG OID644974391 
Producthypothetical protein 
Protein accessionYP_003132199 
Protein GI257054367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00721507 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.747416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGTGGG GACCGCTGTT CGCGTTCGTC GGGTACGTGG GTGAACTGCT CTCCGGTGGG 
CGAGTGAACA CGACGTTGTG GTTGTCGGTC GGTGTCGGTC TGTTCGCGCT CACGGCTCTG
TGGGTGTATG CGCGCCGCCG CTTTTTGTCC ACGCGGGTCA CCGACACGGA GTTGTGGCAG
GGCGGTGAGC GGTTGGCGGT CGATCGCATC ACCGCGGTGG ACGACGTCGA GGCACCGCCG
GGTGCCCGCG TGCTCGGCGG CGGACTGAGC GTGCCGCGGA AGTTCGCCGA GGTGCCGTTG
CGGTTGGACG ACGACACGGT GGTGCTCGCG TGGGCGCGGG ACGGTGACGC GCTGCGGGAG
GCGTTACGGT CAGTGCTACG GGATCGGACA TGA
 
Protein sequence
MTWGPLFAFV GYVGELLSGG RVNTTLWLSV GVGLFALTAL WVYARRRFLS TRVTDTELWQ 
GGERLAVDRI TAVDDVEAPP GARVLGGGLS VPRKFAEVPL RLDDDTVVLA WARDGDALRE
ALRSVLRDRT