Gene Svir_02570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02570 
Symbol 
ID8385595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp255855 
End bp256910 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content70% 
IMG OID644974358 
ProductABC-type Fe3+-siderophore transport system, permease component 
Protein accessionYP_003132166 
Protein GI257054334 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.103691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATTG CCGCGCCCGA AGCCGGGACT CAGCGTGCCG TCTCCGCTCG GCGGTCGGCG 
CATGCGCTGC GGGCACTCGG ACTGCTGGCC GCCGTGGTGG CGCTCGCGTT CGTCGCGCTG
CTCAGCATCT GGCTCGGCTC CAAGGACATC CCGTTCGCCC AGACCTGGAA CATCCTGCTG
GACGGTTCCG GTGACTCCGA CGCGGCCATC ATCATCCACG ACTATCGGAT TCCCCGGACG
CTGCTGGGAA TCGTGGTGGG GGCCGCGCTG GGGCTGTCCG GGGCGTTGAT GCAGGCGTTG
ACCCGGAACC CGTTGGCCGA ACCCGGGATC CTCGGTGTCA ACACGGGTGC GTCCACCGGC
ATGGTCGTGG CCATCGCCTT CCTCGGGATC GGCTCCGTGG TCGGCTACGT GTGGTTCGCG
CTGCTCGGGG CCGCGGTGGC CTCGTTCGTC GTCTACGCCC TCGGTGCCAC GGGGCGCGGG
GCGGCGAGCC CGGAACGGCT GGTGCTGGCC GGGGCGGCGC TCACGGCGGT GCTGTACGCG
TTCAACACGG CGGTGTTGCT GTCGAACGTC GAGGCCTACG ACGAGTACCG GTTCTGGATG
GTCGGGTCAT TGGCCGGCCG CTACTACGAC GTGTTGCTGC CCCTGTTGCC GTTCGTGGCC
GTCGGCGTGG TCCTCGGTCT ATCGCTGATG CGGGCGCTGA ACGTCATGGC GATGGGCGAC
GAACTCGGCA AGGCGCTCGG CTCCCGTCCC AACCGCACCC GGGTACTCGG GGCCGTCGCG
GTGACCTTGC TGTGCGGTTC GGCGACGGCG GCGATCGGTC CGATCGCGTT CGTGGGACTG
GCGGTACCCC ATGCGGCGCG GCTGCTGGTG GGTCCGGACC AGCGTTGGGT GCTGCCGTAC
TCGTTGGTGC TCGCACCGCT GCTGTTGGTG GGCTCGGACG TGGTCGGCCG AGTGGTGGCG
CCTCCGAGCG AAGTGCAGGT CGGCATCGTC ACCGCGGCGA TCGGAGTACC CGTGTTCTGT
GCGTTGTGTC GACGGCGGAG GCTGGCCAGC CTGTGA
 
Protein sequence
MSIAAPEAGT QRAVSARRSA HALRALGLLA AVVALAFVAL LSIWLGSKDI PFAQTWNILL 
DGSGDSDAAI IIHDYRIPRT LLGIVVGAAL GLSGALMQAL TRNPLAEPGI LGVNTGASTG
MVVAIAFLGI GSVVGYVWFA LLGAAVASFV VYALGATGRG AASPERLVLA GAALTAVLYA
FNTAVLLSNV EAYDEYRFWM VGSLAGRYYD VLLPLLPFVA VGVVLGLSLM RALNVMAMGD
ELGKALGSRP NRTRVLGAVA VTLLCGSATA AIGPIAFVGL AVPHAARLLV GPDQRWVLPY
SLVLAPLLLV GSDVVGRVVA PPSEVQVGIV TAAIGVPVFC ALCRRRRLAS L