Gene Svir_02480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02480 
Symbol 
ID8385586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp249157 
End bp249627 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content67% 
IMG OID644974349 
ProductHelix-turn-helix protein 
Protein accessionYP_003132157 
Protein GI257054325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.251654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.974666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGA CATCGACGCG TGACGGCGGC CACGACGAGA CCTCGTCGGC CGCCGGAAGC 
GCCGAGTCGG ACGGCCCGAT GGACCGGGTC GCCAGCCTGG GTAAGGACAT CGGCGCCTAC
ATCAGGCAGC AACGCAACCA CGCCAAGATC TCGTTGCGGC AGCTGTCGAA GCTCGCCGGG
GTTTCCAACC CGTATCTCAG CCAGATCGAA CGGGGACTGC GCAAACCCAG CGCCGAGATC
CTGCAACAGA TCGCCAAGGG GCTGCGCATC TCCGCCGAGG CCCTGTACGT ACAGGCGGGA
ATCCTCGACC GCCCCGTCGG CGGCCCCGTG GTCGACGCGG TTCGCGCCGA TGCCTCACTC
ACCGAACGGC AGAAGCAGGT GCTGCTCGAC GTGTACGAGT CGTTCCTTCG GGAGAACCAA
GGGATGGAGG CCGCGGGTGA GCAGCGCCCC GACCGGAAAC ACAAGGAGTG A
 
Protein sequence
MARTSTRDGG HDETSSAAGS AESDGPMDRV ASLGKDIGAY IRQQRNHAKI SLRQLSKLAG 
VSNPYLSQIE RGLRKPSAEI LQQIAKGLRI SAEALYVQAG ILDRPVGGPV VDAVRADASL
TERQKQVLLD VYESFLRENQ GMEAAGEQRP DRKHKE