Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_02480 |
Symbol | |
ID | 8385586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 249157 |
End bp | 249627 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644974349 |
Product | Helix-turn-helix protein |
Protein accession | YP_003132157 |
Protein GI | 257054325 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.251654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.974666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGGA CATCGACGCG TGACGGCGGC CACGACGAGA CCTCGTCGGC CGCCGGAAGC GCCGAGTCGG ACGGCCCGAT GGACCGGGTC GCCAGCCTGG GTAAGGACAT CGGCGCCTAC ATCAGGCAGC AACGCAACCA CGCCAAGATC TCGTTGCGGC AGCTGTCGAA GCTCGCCGGG GTTTCCAACC CGTATCTCAG CCAGATCGAA CGGGGACTGC GCAAACCCAG CGCCGAGATC CTGCAACAGA TCGCCAAGGG GCTGCGCATC TCCGCCGAGG CCCTGTACGT ACAGGCGGGA ATCCTCGACC GCCCCGTCGG CGGCCCCGTG GTCGACGCGG TTCGCGCCGA TGCCTCACTC ACCGAACGGC AGAAGCAGGT GCTGCTCGAC GTGTACGAGT CGTTCCTTCG GGAGAACCAA GGGATGGAGG CCGCGGGTGA GCAGCGCCCC GACCGGAAAC ACAAGGAGTG A
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Protein sequence | MARTSTRDGG HDETSSAAGS AESDGPMDRV ASLGKDIGAY IRQQRNHAKI SLRQLSKLAG VSNPYLSQIE RGLRKPSAEI LQQIAKGLRI SAEALYVQAG ILDRPVGGPV VDAVRADASL TERQKQVLLD VYESFLRENQ GMEAAGEQRP DRKHKE
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