Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_02320 |
Symbol | |
ID | 8385570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 233524 |
End bp | 234981 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644974333 |
Product | FAD/FMN-dependent dehydrogenase |
Protein accession | YP_003132141 |
Protein GI | 257054309 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.26997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCATGC TCGACGCAAC GGTGCGTTCG GCACTGACAG CCGCGGTCGG CGAGGACAAC GTCATCTCCG ACCCGGTGGC CCTGCGCAGC TACGAATGTG ACGGCCTCAC CGGTTTCCGA GTGGTCCCCG AACTCGTCGT ACTCCCCACC GACACCGACG GCGTCGTCGC CGCCGTGCGC GCCTGCCACG ACCACGGTGT CCCCTACGTC GCCCGAGGGG CGGGCACCGG CCTGTCCGGT GGCGCACTAC CCGTCGCCGA CGGCATCGTC ATCTCCCTGC AACGACTGCG CCGCGTCCTG GAGGTCGACC CGCTCGACCG GCGGGCCACA CTCCAGCCCG GGGTCACCAA CCTCGACATC ACCAAGGCCG CCGCGCAGTA CGGGCTGTAC TTCGCACCCG ACCCCTCCAG CCAGCAGGTG TGCACCATCG GCGGCAACGT CGCCGAGAAC TCCGGTGGCG CCCACTGCCT GAAATACGGC TTCACCACCA ACCACGTGCT GTCGATGACC GTCGTCCTGC CCGACGGCGA ACTGGTCACC CTCGGCGGCG ACACGACCGA ACAACTCGGG CCGGACCTGC GCGGCGTGTT CATCGGTTCG GAGGGCACGC TCGGCATCGT CTGCGAGATC ACGGTGCGGC TGCTACCCGT ACCCGAAACC GTGCGTACCC TGCTCGCCGA CTTCGACTCG GTCCGGGAAG CGGGCGAGGT GGTCAGCGAC ATCGTGGCTG CGGGCATCGT CCCCGCCGCC GTGGAGATGA TGGACAACCT CGCCATCCAG GCGGCCGAAC AGGCGGTACA CGCCGGATAC ACCCTCGACG CGGCCGCCGC GCTCGTGGTG GAACTCGACG GCCCGGCCAC CGAGTGCGCC GAGCAGTTCG AACAGGTGAA GGCGATCTGC GAACGACACA ACTGCACCCG ACTGCACGTC GCGGACAACG CCGACGAACG GGCGAGGATC TGGAAAGGCC GCAAGGCCGC GTTCGCCGCC GTCGGCCGCA TCAGCCCCGA CTACTTCGTA CAGGACGGCG TCGTACCCCG CACCCGGCTG GCCGAGGTGC TGGGTCGCAT CGAGGACATG GGCCGGACCG CCGGACTGCG CGTGGCCAAC GTCTTCCACG CGGGCGACGG GAACCTGCAC CCCCTGGTGC TGTACGACGC GGCCGCCGGG GAACAGGAAC GCGCCGAAAA ACTGGCGAAG CGGATCGCGG AACTCTGTGT CGAACTGGGC GGCTCGCTCT CCGGCGAACA CGGCATCGGC ACCGACAAGG CGTGTTCGAT GCCGCGCATG TTCAGCGTCG ACGACCTCGA CACGATGGAC CGCGTCCGCT CGGCGTTCGA CCCGGACCGG CTGTGCAACC CGGGCAAGCT CCTGCCCACA CCGAGACTGT GCGGCGAAGC GCCCGGCCCC TACCGTCCAC ACCCGCTGGA GGAGGCTGGA GTGATCGAAC GGCTATGA
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Protein sequence | MLMLDATVRS ALTAAVGEDN VISDPVALRS YECDGLTGFR VVPELVVLPT DTDGVVAAVR ACHDHGVPYV ARGAGTGLSG GALPVADGIV ISLQRLRRVL EVDPLDRRAT LQPGVTNLDI TKAAAQYGLY FAPDPSSQQV CTIGGNVAEN SGGAHCLKYG FTTNHVLSMT VVLPDGELVT LGGDTTEQLG PDLRGVFIGS EGTLGIVCEI TVRLLPVPET VRTLLADFDS VREAGEVVSD IVAAGIVPAA VEMMDNLAIQ AAEQAVHAGY TLDAAAALVV ELDGPATECA EQFEQVKAIC ERHNCTRLHV ADNADERARI WKGRKAAFAA VGRISPDYFV QDGVVPRTRL AEVLGRIEDM GRTAGLRVAN VFHAGDGNLH PLVLYDAAAG EQERAEKLAK RIAELCVELG GSLSGEHGIG TDKACSMPRM FSVDDLDTMD RVRSAFDPDR LCNPGKLLPT PRLCGEAPGP YRPHPLEEAG VIERL
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