Gene Svir_02130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_02130 
Symbol 
ID8385551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand+ 
Start bp216180 
End bp217169 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content69% 
IMG OID644974314 
Productflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase 
Protein accessionYP_003132122 
Protein GI257054290 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03558] luciferase family oxidoreductase, group 1 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.307458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCA AGTACTCCAT CCTCGATCTC GCCGTGATCG GTCGGGGTGA GACACCGAAG 
CAGGCCCTGG AGGCGAGTGT CGCGCTGGCA CAGCGTGCCG AGGAGACCGG GTACCACCGC 
GTCTGGTACG CCGAGCACCA CAACTTCTCC TCGATCGCCT CCTCGGCCAC CAGCGTGGTC 
ATCGCCCACG TCGCCGCGCA CACCAGCACC ATCAGGCTCG GCGCGGGCGG CATCATGCTG 
CCCAACCACT CCCCGCTGGT CATCGCCGAG CAGTTCGGCA CCCTGGCGAC CCTGCACCCC 
GGACGCATCG ACCTCGGACT CGGCCGCGCG CCGGGCACCG ACCAGAACAC GCTGCGGGCG 
CTGCGCCGCG ACCCCACCTC GGCGGACGCG TTCCCGCACG ACGTGCGGGA ACTCCAGGGC 
TACCTCCGGG GCGAGAGCCT CATCCCCGGA GTCGACGCCA TCCCCGGCAA GGGCACCAAC 
GTGCCGCTGT ACATCCTCGG CTCGTCGCTG TTCGGCGCGC AGCTCGCCGC CGCCCTCGGA 
CTGCCGTACG CGTTCGCGTC GCACTTCGCG CCCGACGCGC TGCGGCAGGC CGTCGCGTTG 
TACCGCGAAC AGTTCCGGCC GTCGGAGCAG CTGCAGGAGC CCTACGTCAT CGCGGGCGTC 
AACGTGATCG CCGCCGACGA CGAGGACGAC GCGCAGGAGC AGTACCTCAC GATGAAGCGC 
CAGCGCGTGA ACCTGCTGTT GGGTCGCCGA GGCCACAGGT TCACCGACGA GGAGGCCGAC 
CAGATCCTCG CCTCGCCCCA CGGCGCGCAC ATCCACAACA TGATCAAGTA CACGGCTGTG 
GGCACGCCCG AGAAGGCCAA GGCCTTCCTC GACGACTTCG CCGTCCACGC CGACGCCGAC 
GAACTCATCA CGGCCCACCA GTCGCCCACC GTCAAGCAGC GACTCCGCTC CGTGGAACTT 
CTGGCGCAGG TCGCGGGTCT GATGTCGTGA
 
Protein sequence
MTVKYSILDL AVIGRGETPK QALEASVALA QRAEETGYHR VWYAEHHNFS SIASSATSVV 
IAHVAAHTST IRLGAGGIML PNHSPLVIAE QFGTLATLHP GRIDLGLGRA PGTDQNTLRA 
LRRDPTSADA FPHDVRELQG YLRGESLIPG VDAIPGKGTN VPLYILGSSL FGAQLAAALG 
LPYAFASHFA PDALRQAVAL YREQFRPSEQ LQEPYVIAGV NVIAADDEDD AQEQYLTMKR 
QRVNLLLGRR GHRFTDEEAD QILASPHGAH IHNMIKYTAV GTPEKAKAFL DDFAVHADAD 
ELITAHQSPT VKQRLRSVEL LAQVAGLMS