Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_01680 |
Symbol | |
ID | 8385506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 178043 |
End bp | 178804 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644974272 |
Product | predicted nucleoside-diphosphate sugar epimerase |
Protein accession | YP_003132082 |
Protein GI | 257054250 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.576893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.223324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG CTGTCCTGGG CGCTACCGGA ACGGCCGGTT CCCGCGTCGT GCGGCGTCTG AAGGATGAGA ACGTCGACGT CGTCGCGGTG TCCCGAGCCA GTGGTGTCGA TCTGGTCACC GGTGACGGTC TGGTCGATGC GCTGGCCGGG GTGGATGCCG TTGTGGACGC GTCGAACGCC TTACCGCCAA ACGGCTCGAT GGAATGGGGG GAGGCACTCA CCACCGCCAC GCGCAACGTG GTGGACGCCT GTGGGCGGCG GAAGGTGTCG CGCCTGGTCT TTCTGTCGAT TCTCGGGGCC GAGGACCCCG TGTTCGACGA GTTTCCCTAT TGCGTGGCGA AACGGGAACA GGAATCGATC ATCGGTGAAA GCGGCCTGAA CGCCACGATC GTCAAGACCA CACAGTGGTA CGAGTTCGCG ACCAATCCCG CTGCGGTGGT CTTCCACGAC GACAGGGTCG AGGTGCAGGA CTGGTTGGTG CAGCCGGTCG CGGCCGACAC GGTTGCCGAT GTCCTCGTCC GAGAAGCCTT GGATACGTCC GGTGGGGGCC AGGTACTGAT CGCCGGTCCG GAGAGGATTC GTCTGCCGGA ATTGGCCCGG CGTCGATTGA AGACGCTCGG GGACGAGCGG CCGGTGCATG CCATTGAGCC GGACCTACCC GTGCTCGCCG AGGGTGCGTT GCTGGCGTGG GAGCGGGCTA AGGTCATGGG GCCGGGACTG GAGGAGTGGC TCGCCTCGCT GCGGCGGGAA ACCACACGAT GA
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Protein sequence | MKIAVLGATG TAGSRVVRRL KDENVDVVAV SRASGVDLVT GDGLVDALAG VDAVVDASNA LPPNGSMEWG EALTTATRNV VDACGRRKVS RLVFLSILGA EDPVFDEFPY CVAKREQESI IGESGLNATI VKTTQWYEFA TNPAAVVFHD DRVEVQDWLV QPVAADTVAD VLVREALDTS GGGQVLIAGP ERIRLPELAR RRLKTLGDER PVHAIEPDLP VLAEGALLAW ERAKVMGPGL EEWLASLRRE TTR
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