Gene Svir_01640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01640 
Symbol 
ID8385502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp176018 
End bp176473 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content64% 
IMG OID644974268 
Producttranscriptional regulator 
Protein accessionYP_003132079 
Protein GI257054247 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.98097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.211927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTGGC TGACCGACAC GGAGATGTCG GTATGGCGTT CCTACATCGT CTCGACGTTG 
ATGTTGCGGC AGCGACTGCA CAGGGAACTT TCCGAACGGC ATGCGCTGTC GCTGATCGAT
TACGAGGTCA TGGTCTGTCT GTCGGAGGCC GAGAACAACG CCATGCGCAT GACCGAGCTG
GCGAAGACGC TCGGGTCCAC CAAGAGTCGG CTGTCGCACC AGATCGCCCG CATGGAGGCG
GAGGGCTACG TGCGGCGTAT CAAGCACGTG GGCGACCGCA GAGGGGTGAC CGCGGAGCTC
ACGCAGAAGG GGGCCGAGCT GTTGCACGAG TCCGCGCCCA CGCACGTGAA GGGCGTGCGG
GCCCACTTCG TGGATCTGCT GACCGAGCAG GAGAAACAGC TCATGGGACG CGCGTTCTCA
CGGGTCGTCA CACACCTGTC GGGGCTGGGG GACTGA
 
Protein sequence
MRWLTDTEMS VWRSYIVSTL MLRQRLHREL SERHALSLID YEVMVCLSEA ENNAMRMTEL 
AKTLGSTKSR LSHQIARMEA EGYVRRIKHV GDRRGVTAEL TQKGAELLHE SAPTHVKGVR
AHFVDLLTEQ EKQLMGRAFS RVVTHLSGLG D