Gene Svir_00780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00780 
Symbol 
ID8385416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp80992 
End bp82305 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content69% 
IMG OID644974182 
ProductFlagellar basal body-associated protein FliL 
Protein accessionYP_003131994 
Protein GI257054162 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.482068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTACTGA CCGGTCACGT GTCGCTGTCC GGGTTCGAGA TAGGGGGCCT CACGGTGTCC 
TGGCAGGAAG AGTTGCGCAA GCTGGACGAG GAGCTTGCGT CAGGTCGCCT CTCCGCAGAC
GACTACCGGG TTCGCCGAGA CCAGGTGCTG TCATCCGCGG TGACCAGCGG CGAGAATCCC
GCCGAAGGAC AGCAGGCCCA GCCGCAGCAG GCGCAGCCGC AACAGGCGCA GCCACAGCAG
CCCCCAGCGC AACCGGACCA GTCCGCGGAC AGCAGCGCCA ATTCGACCCA GATCATCTCG
CCGGCCAGCC TCCCCCAGGG GAACCCCCAG CAGCATGCGG AGGGCAACCA GCTCGCCAAC
GCCGAGCGCA CGCAGGTCGT GTCCCCGTGG CAGGGCCAAC CGCAACAGCA GCCCCCGCAG
TACCCGCAGC AGCCCGGTCC CGTCTCGCCT GCGGCAGGGT TCCAGCAACC CGGCCCCGCC
TCGCCTGCGG CAGGGTTCCA ACAGCCCGGC CCCGCGTCAC CGGCCGCGGG GTTCCAACAG
CCGGCACAGC CGTGGAACGC CCCCCAGGCG GACCAGAGCC CGCCGTGGGG TGGTTCGGAA
TTCCCGCCGC TGACCCCACC CACCCAGACG GAGGAGACGG GCCAGGGCCC GGAGTCGTTC
GAGACGTCGT CCGGTAAGGG CAAGAAGATA GCCGGCATCA TCGCGGCCGT GGTCCTGCTC
GCGGGACTCG GCGTCGGCGC GTGGTTCCTC TTCTCCGGCG GTTCCGACGA CGACAACGTC
GCGGACGACA AGCCGACGCA AACGGCCACG AACCCCGCGC CCACGTCGTC CGCACCGCCG
AAGGACGACC TGGAGATCGC GCAACTGCCC GGCGCGACGA GTGAGCGGAC GGACATCACC
TCGTTCGAGG ACGTGGTGGC CCACCAGGTG CTGACCGAGG ACGAGAACAA GATCTACGAG
GACGCGGGGG CTGGGGAGGC CAGGATGGTC GTCTCCGAAC TGTCCTCCGA CGTCAAAGTG
GTCGTCCTGA CGGTGCAGAC CGCGTCCGCG AGTGCCGCGT CGACCGCGGT CGACGACCTC
GTGGCGCTGC AGAAGAAGAA CGGCATGGAC CCGTACGAAG GCGAGACCCC GCAGGGCGTG
GAGGCCACCC AGGTCGACAA GAACGACAAG TTCCCGGCCG CCGCACGCGC GCACTACGCA
CACGGCAACA CGGTCGTGCG CATCCAGGTC ACCGCGCCGG AACTCTCCGG GGTCGGCGAT
CCCTTCGAGG AGATCATCGC GACACAGCTG CAGGCGCTGC CGGCCGATGT CTGA
 
Protein sequence
MVLTGHVSLS GFEIGGLTVS WQEELRKLDE ELASGRLSAD DYRVRRDQVL SSAVTSGENP 
AEGQQAQPQQ AQPQQAQPQQ PPAQPDQSAD SSANSTQIIS PASLPQGNPQ QHAEGNQLAN
AERTQVVSPW QGQPQQQPPQ YPQQPGPVSP AAGFQQPGPA SPAAGFQQPG PASPAAGFQQ
PAQPWNAPQA DQSPPWGGSE FPPLTPPTQT EETGQGPESF ETSSGKGKKI AGIIAAVVLL
AGLGVGAWFL FSGGSDDDNV ADDKPTQTAT NPAPTSSAPP KDDLEIAQLP GATSERTDIT
SFEDVVAHQV LTEDENKIYE DAGAGEARMV VSELSSDVKV VVLTVQTASA SAASTAVDDL
VALQKKNGMD PYEGETPQGV EATQVDKNDK FPAAARAHYA HGNTVVRIQV TAPELSGVGD
PFEEIIATQL QALPADV