Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_00740 |
Symbol | |
ID | 8385412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 73413 |
End bp | 75776 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644974178 |
Product | glycosyltransferase |
Protein accession | YP_003131990 |
Protein GI | 257054158 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.456388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGTGA GCGGTAAACC CATGAGGCAC CGGATGTGGA CGCCGCTGCC ACCGGAGCGC AGCGGTATCT CCGACTACAG CTACGAACTG CTCGAAGCGC TGTCGGACAT CGCCGATGTG ACGGCGGTCA GCAGGTACGC GGAACAAGCC CAGACACCCC CGGGCGTTCC GGTGGTGGGG CCGGACGACG AGGCACCGTC GGACGTCCTG AACACCTATC ACATGGGCAA TCACGCCGGG GTCCACTCGT GGCTCTACCG GAAGGCGCTC GCCACGCCCG GTGTGGTCGT GCTGCACGAC ACCTCCCTGC TGGACTTCAA TCTCGGCTAC TTCGGCGGCC TCGACTCCCC CGAGTTCCGG GAGGAGGTCC GCTTCGCGCA CGGCCCGATC TGGGGCGACC CGAACGACCC CGCGCTGTTC AGAGGCTGGC CCGCCGTCGA GGTGGACGGG GTGAAGCACC TCGACGGGCA GACGCTCACC ATGGAGCGGC GGCTGGTGTC GGCCAGCAAG GGCGTGATCG TGCACGATCC GTTCTCGGCG AGGTTGCTGC GACAGCGGTA TCCCGGCCTG CCGGTCCACA CCGTGCCGTC CGGTGCGCCG CTGCGCGACG ACACGGGGCG TCGCAGGACC CGCGCCCGAC TCGGCTGGCA GGACGACCAC GTCGTGTTCG GGGTGTTCGG CGGGTTCAAC CGCATCAAGC GGACCACCGT GGCGGTGCTG GCCTTCGCCA ACGTCCGGCG ACGGTGGCCG CAGGCCCGGC TGGTGATCGC GGGTCACGCC GACTTCCCGG ACGTCGTCGA CGACGTGCGG AAGTTGATCG GGGAACTCGG AGTGTCCGAT TCGGTGCATC TCGCGCTGTC CCCGGACAAG ACCGAGTTCG AACAGCTGAT CACCGCCACC GACGCCGTCC TCAACCTGCG CTGGCCGACC GCCGGGGAGA CCAGCGCCGT GATGATGCGC GCGTTCGGCG CGGGCAAGGT CGTCATCACC AGCGACCTAC CGCAGCATCG ACACCTGGAC CCGACGTTCT GCTGGCTCGT CCCGACCGAT CCCGCGCACG AAGCCGAAGC ACTGTCAGAA CTGCTGGAAC GGGTGGTGTG CTGGCCCGAC GAGGCTCGAC AGGCCGGTCG GCAGGCCCGG GAGTACGTCC GCGAGCACGC CTCCTGGCCG GTGGTCGCCC AGGCGTACCG GAAGGCCTTG GAGGCCATCG GCGCCGAGCG GCAGGCCGCC CCCGTCGTCA CGCCGACCCG GCCGGGCGTC AACGTGTTCG CCGACGCGCG GGCCACCACG GGATTGGCGG AGTCGGCGCG ACGACACGCA CTCGCGCTCG TCGACACCGG TGTCGACATG ACGTTCACCG AGTTCAACAC CAGGGCGCCC AACCGGTCGT TGGCCGTGCC ACGCAAACTC GCCGACCTGC GACGCGGCAA GGACCATCCG ATCGATCTGT GGTTCATCAA CGTCAACGAG TTCCAGCTGA TCCCGGAACA CGCGCTGGAC CGGTACACGA TCGCGATGTG GGCGTGGGAG CTGCCCGAGG TCCCGGACTA CGCGTTGAAA CAGTTGCCGC GGATGGACGA GCTCTGGGTG CTGTCGTCGT TCGTCGCCGA CGCCTTCCGC ACCGCGACCG ACATGCCCAT CACCGTGATC CCCAGTGTCG TACCGCAGCG GCCGGGCATC CAGGGCGATC GCGCGAAGTT CGGTCTGCCT GACGACGGGC TCGTCGTGCT CTTCAACTTC AGCGCCTCCT CCAGCGACGC CAGGAAGAAC CCGTGGGCGG TGATCGAGGC CTTCCGGCAG GCGTTCCGGC CGAGCGAGCG GGGCACCGAC GCACACCTGG TGATCAAGGC GGTCGACCTG CACCGTTTCC CCGAACTGTC CGCGCAGTTG GCACAATCGG TGGCGAGCGT GAACGGCACG CTGATCGGAC GGGACCTCAC CAGGGCGGAC ATGGACTGTC TACTGGCCAC CTGCGACGTC TACGTCTCGC TGCACCGCTC GGAGGGGTTC GGCCTCGGCA TGGCAGAGGC GATGGCGATG GGCAAACCGG TGATCGCCAC GGGCTACGGC GGCAACATCG ACTTCATGCC GCCGGGTTCG GCGGCCGTCG TGGGTTACGA CATCCGCCCC ATCAACGATC GCGACCACCG CTTCGGCGCG GAGTTCGGTG ACTGGTACCG CCCGGGCCAG CTCTGGGCGG AACCGGACGT CGAACAGGCC GCGCGCTGGC TGCGTCGACT CGCCGAGAGC GAGTCCCTGC GCCGCACGAT GGGTGCGCGC GGGGCCCAGG CCGTCAAAGA GGTCTGCAGC CCGGAAGCCG TCGGCGCCGC GATGGTGAAA CGATTGAACG AGATCGGGCT CTAA
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Protein sequence | MAVSGKPMRH RMWTPLPPER SGISDYSYEL LEALSDIADV TAVSRYAEQA QTPPGVPVVG PDDEAPSDVL NTYHMGNHAG VHSWLYRKAL ATPGVVVLHD TSLLDFNLGY FGGLDSPEFR EEVRFAHGPI WGDPNDPALF RGWPAVEVDG VKHLDGQTLT MERRLVSASK GVIVHDPFSA RLLRQRYPGL PVHTVPSGAP LRDDTGRRRT RARLGWQDDH VVFGVFGGFN RIKRTTVAVL AFANVRRRWP QARLVIAGHA DFPDVVDDVR KLIGELGVSD SVHLALSPDK TEFEQLITAT DAVLNLRWPT AGETSAVMMR AFGAGKVVIT SDLPQHRHLD PTFCWLVPTD PAHEAEALSE LLERVVCWPD EARQAGRQAR EYVREHASWP VVAQAYRKAL EAIGAERQAA PVVTPTRPGV NVFADARATT GLAESARRHA LALVDTGVDM TFTEFNTRAP NRSLAVPRKL ADLRRGKDHP IDLWFINVNE FQLIPEHALD RYTIAMWAWE LPEVPDYALK QLPRMDELWV LSSFVADAFR TATDMPITVI PSVVPQRPGI QGDRAKFGLP DDGLVVLFNF SASSSDARKN PWAVIEAFRQ AFRPSERGTD AHLVIKAVDL HRFPELSAQL AQSVASVNGT LIGRDLTRAD MDCLLATCDV YVSLHRSEGF GLGMAEAMAM GKPVIATGYG GNIDFMPPGS AAVVGYDIRP INDRDHRFGA EFGDWYRPGQ LWAEPDVEQA ARWLRRLAES ESLRRTMGAR GAQAVKEVCS PEAVGAAMVK RLNEIGL
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