Gene Svir_00580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00580 
Symbol 
ID8385396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp56905 
End bp57936 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID644974162 
Productputative copper export protein 
Protein accessionYP_003131974 
Protein GI257054142 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1276] Putative copper export protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0706587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGAA CCGCCATCGC GACATCGTGG TTACCGCGTT TCGGGCCGCT GATCGCGATC 
GTCACGGCCG CGCTGTCGGG TGTCCTCATC GCCCTGGCCC TCACCGTGTC GGCTCCCGTC
AGCGGCATCA CCCAAGCGAG CACGGCGATC CGGGTCGGCT TGCCCATCGC CCGTGCGGCG
ATCGATCTCG CAGCCGTCGC CGCCGTGGGA TTCGCCCTGC TGCCGCTACT GGCCGGTGAA
CGTACTCCCG CGTCGGCCCG ACCCGTGTTC GCGCGGGCCA GAACCGTCGT CATCGCCTCG
GCGCTGGTGT GGGCGGTGGC GGCGCTGGCC AGTCTCGTGC TGCAGACGGC GGAGTTGTAC
CGACCTGACG GCACCGCGGT CTCGTTCACC GATCTCCGCT CCTATGTCGA CACCGTGGCC
GGGGGCAAGG CCCTGCTCAT CGTGGCGGGG TTCGCGCTCG TCCAAGCTCT GCTAGCCGGA
GCGGCCACGC GGCTCGGTCG TAAGGTGCCG CCCGAATTGA TCGTGGGCTG CGGTCTGTTC
GCGCTGCTGC CGCTCCCGGT CACCGGACAC GCCACCATGT CGCACTTCGC CGAGCACACG
ATGGTGTTGC TCGAACTGCA CATCGTCAGC GTCGTCGCCT GGACCGGCGG GCTCGCCGCC
ATCGTCGTGC TGGCCGCACG ACACCGTGCC CTGCTGGCGA CCGTCCTCCC GCGGTTCTCC
CAACTGGCCA CCGTATGTCT GGCCGTGGCG GTGGCCACCG GTGTGCTGAA CGGTCTCGCC
CAATTCATCG AGAACCCTCT GGTGCGGTTG TGGCCGGACC TGTTCACCAC TCCCTACGGT
CAACTGTTGG TGGCCAAGAC GGTGGCGCTG GCGGTGATCG CCGGGCTCGG CGGCTACACG
CGGTGGAAGC TGCTCCCGAA CGTGATCCGG CACCGACGCA CCGCTCTCGT GTCGTTCGCC
GTCGTCGAAC TCGCCCTGAT GGGGCTCGCG TTCGGTTTCG CGGCCGTCCT CGGCCGGACG
CCGCTGACGT GA
 
Protein sequence
MSRTAIATSW LPRFGPLIAI VTAALSGVLI ALALTVSAPV SGITQASTAI RVGLPIARAA 
IDLAAVAAVG FALLPLLAGE RTPASARPVF ARARTVVIAS ALVWAVAALA SLVLQTAELY
RPDGTAVSFT DLRSYVDTVA GGKALLIVAG FALVQALLAG AATRLGRKVP PELIVGCGLF
ALLPLPVTGH ATMSHFAEHT MVLLELHIVS VVAWTGGLAA IVVLAARHRA LLATVLPRFS
QLATVCLAVA VATGVLNGLA QFIENPLVRL WPDLFTTPYG QLLVAKTVAL AVIAGLGGYT
RWKLLPNVIR HRRTALVSFA VVELALMGLA FGFAAVLGRT PLT