Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_00580 |
Symbol | |
ID | 8385396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 56905 |
End bp | 57936 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644974162 |
Product | putative copper export protein |
Protein accession | YP_003131974 |
Protein GI | 257054142 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1276] Putative copper export protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0706587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAGAA CCGCCATCGC GACATCGTGG TTACCGCGTT TCGGGCCGCT GATCGCGATC GTCACGGCCG CGCTGTCGGG TGTCCTCATC GCCCTGGCCC TCACCGTGTC GGCTCCCGTC AGCGGCATCA CCCAAGCGAG CACGGCGATC CGGGTCGGCT TGCCCATCGC CCGTGCGGCG ATCGATCTCG CAGCCGTCGC CGCCGTGGGA TTCGCCCTGC TGCCGCTACT GGCCGGTGAA CGTACTCCCG CGTCGGCCCG ACCCGTGTTC GCGCGGGCCA GAACCGTCGT CATCGCCTCG GCGCTGGTGT GGGCGGTGGC GGCGCTGGCC AGTCTCGTGC TGCAGACGGC GGAGTTGTAC CGACCTGACG GCACCGCGGT CTCGTTCACC GATCTCCGCT CCTATGTCGA CACCGTGGCC GGGGGCAAGG CCCTGCTCAT CGTGGCGGGG TTCGCGCTCG TCCAAGCTCT GCTAGCCGGA GCGGCCACGC GGCTCGGTCG TAAGGTGCCG CCCGAATTGA TCGTGGGCTG CGGTCTGTTC GCGCTGCTGC CGCTCCCGGT CACCGGACAC GCCACCATGT CGCACTTCGC CGAGCACACG ATGGTGTTGC TCGAACTGCA CATCGTCAGC GTCGTCGCCT GGACCGGCGG GCTCGCCGCC ATCGTCGTGC TGGCCGCACG ACACCGTGCC CTGCTGGCGA CCGTCCTCCC GCGGTTCTCC CAACTGGCCA CCGTATGTCT GGCCGTGGCG GTGGCCACCG GTGTGCTGAA CGGTCTCGCC CAATTCATCG AGAACCCTCT GGTGCGGTTG TGGCCGGACC TGTTCACCAC TCCCTACGGT CAACTGTTGG TGGCCAAGAC GGTGGCGCTG GCGGTGATCG CCGGGCTCGG CGGCTACACG CGGTGGAAGC TGCTCCCGAA CGTGATCCGG CACCGACGCA CCGCTCTCGT GTCGTTCGCC GTCGTCGAAC TCGCCCTGAT GGGGCTCGCG TTCGGTTTCG CGGCCGTCCT CGGCCGGACG CCGCTGACGT GA
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Protein sequence | MSRTAIATSW LPRFGPLIAI VTAALSGVLI ALALTVSAPV SGITQASTAI RVGLPIARAA IDLAAVAAVG FALLPLLAGE RTPASARPVF ARARTVVIAS ALVWAVAALA SLVLQTAELY RPDGTAVSFT DLRSYVDTVA GGKALLIVAG FALVQALLAG AATRLGRKVP PELIVGCGLF ALLPLPVTGH ATMSHFAEHT MVLLELHIVS VVAWTGGLAA IVVLAARHRA LLATVLPRFS QLATVCLAVA VATGVLNGLA QFIENPLVRL WPDLFTTPYG QLLVAKTVAL AVIAGLGGYT RWKLLPNVIR HRRTALVSFA VVELALMGLA FGFAAVLGRT PLT
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