| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00400 |
|---|
| Symbol | |
|---|
| ID | 8385378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 36850 |
|---|
| End bp | 38286 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644974144 |
|---|
| Product | serine/threonine protein phosphatase |
|---|
| Protein accession | YP_003131957 |
|---|
| Protein GI | 257054125 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0631] Serine/threonine protein phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.784973 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTCG TCCTACGCTA CGCGGCCCGC AGTGATCGAG GCCTGGTTCG GTCGAACAAC
CAGGACTCGG TGTATGCCGG CCCTCGTCTA CTCGCGCTCG CCGACGGCAT GGGCGGACAT
GCCGCCGGTG AGGTCGCCAG CAAAGTTGTC ATCGCCTCGC TGGCACATCT CGACGATGAC
GAGCCCGGCG ACGATCTGGT TACCCAACTG CGCGAAGCCG TGAACCAAGG GAACCAGGCG
ATCTCCGAAC TCGTCGCGGG TGACCCCGAA CTCGACGGGA TGGGGACCAC CCTGACCGCG
GTGTTGTTCT CCGGTTCCCG GCTCGGCCTC GTACACGTAG GCGACTCCCG TGCCTACTTG
CTGCGCAACG GGCAGTTCTC CCAGATCACC CGGGACGACA GCTTCGTCAA CGAGCTGTTG
GAGCAGGGAC GTATCACCGA GGAGGAGGCC GCGACGCACC CGCAGCGATC CCTGCTGCTG
AAGGCGCTCA CCGGCCACGA GGTCGAGCCG AGCGTCACGG TGCGGGAGGC TCGCGCGGGC
GACCGATACC TGCTGTGCTC CGACGGATTG TCGGGCATGG TGAGCGACGA GACGCTCGCC
GAGGCCCTGC GTATCCCGGA CCCACAGGAA TGCGCCGACC GGATGATCGA GTTGGCGCTC
AAGGGCGGTG GCACCGACAA CGTCACGGTG ATCGTGGCCG ACGTCGTCGA CGTGGACTTC
GGCGAGGACG CCCCCATCGT CGGCGGCGCC GCCGGTGACG GGACCGACGA GGGACCGCCG
GTCGACTCCC CCGCCGCACG GGCGCGCGCG CTCACCGCGC CGCCCCCTCC ACCGCCGGTC
CCGCAACAAA CCGAGCAGCT GGAGACACAA CCCGACCCCA AGGCCAAACG ACGTAAGCGG
CTCCGTCTGC TGCTGGCTTT CGGGCTCGCC CTCGTGCTGT TGGCCGCGGC GGCCTTCGCC
ACCCGGTACT TCGTACTGCG GCAGTACTAC GTCGGGGTCG ACGAGGAGAC CTCCGAGGTC
GTGGTCTACC AAGGTGTTCC CGGCAGCATC CTCGGGTTCA AACTGCAGCA GAAGGCCGAA
GGATCCTGCC CACCCGAGGC GTCCCTGTGC GATCCGCTGA TGCTCGAGGA TCTTCAGCAG
GACGCGCGTG CGGCTGTGAG CAACGGTGTC AAGCGGGACG GTCTCGTCGA ATCACGCGAG
TACATCAACA CGCTTCGCCA CAACAACATG CTGGAAATCT GCGACGACGA ATCCGACCAG
GCGCAAGGCG GTGGTCTCGG GGGAATCGAG CAGGGCGGCG AAACACAGGA CGCGGCCGAG
GGAGCGACCC CCGGTGCGCC GAACGAACCG ACCAACACGA CGGCGGCGGG GCGGAACGAG
GGCGGACAGC GACCGGGTGT GGACTGCCGC CCGGCGCCCA GCTCGGGCGG TAACTGA
|
|---|
| Protein sequence | MTLVLRYAAR SDRGLVRSNN QDSVYAGPRL LALADGMGGH AAGEVASKVV IASLAHLDDD
EPGDDLVTQL REAVNQGNQA ISELVAGDPE LDGMGTTLTA VLFSGSRLGL VHVGDSRAYL
LRNGQFSQIT RDDSFVNELL EQGRITEEEA ATHPQRSLLL KALTGHEVEP SVTVREARAG
DRYLLCSDGL SGMVSDETLA EALRIPDPQE CADRMIELAL KGGGTDNVTV IVADVVDVDF
GEDAPIVGGA AGDGTDEGPP VDSPAARARA LTAPPPPPPV PQQTEQLETQ PDPKAKRRKR
LRLLLAFGLA LVLLAAAAFA TRYFVLRQYY VGVDEETSEV VVYQGVPGSI LGFKLQQKAE
GSCPPEASLC DPLMLEDLQQ DARAAVSNGV KRDGLVESRE YINTLRHNNM LEICDDESDQ
AQGGGLGGIE QGGETQDAAE GATPGAPNEP TNTTAAGRNE GGQRPGVDCR PAPSSGGN
|
|---|
| |