| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00270 |
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| Symbol | |
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| ID | 8385365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 23723 |
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| End bp | 24733 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974131 |
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| Product | uncharacterized membrane protein |
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| Protein accession | YP_003131944 |
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| Protein GI | 257054112 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.361521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0722571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGAGTA ACCACGAGGT GACGGACGTC GGCCGGGAAT GCAGGAGTGT CGACAACACT
GTGACCGAGC CCCCCAACCC CCCGCCGTAT GGGCAGTCAC AACAGCAGGA GGCCCTGCCG
GGATGCTGGT GGCATCCGGG CAGGCAGACC GGCCTGCGTT GTGTGCGGTG TGACCGGCCC
GCGTGTCCGG ACTGTCTGCG CGAGGCGTCG GTCGGGCATC AGTGCATCGA CTGTGTGACC
TCGGCGCGGC AGCAACAACG CGCCCAGGCA GAGGCGTACC GGAGGGCCGG GTACGGCGCC
CGTACGGTGG TGGGGGCCCG AGTCCCACAG CGGGTCGTCG TGGTCCCGTT GCTGATCGCC
ATCAATGTGG TCATCTACGC GCTCACGGCC TTCCAAGCCG GCAGCGTGAT GGACAACCAC
CTGTCCCCGG TGTTCGAGGA CGGTGTGCTG TGGCCCGTGG CCGTCGTCCT GTTCGACGAA
TGGTGGCGGC TGCTCGCATC GGGCTTCCTG CACTACGGCC TGCTCCACCT GGCGATGAAC
ATGCTCGCGC TGTGGGTGCT GGGCCGGGAC CTGGAACTCC TGCTCGGACG CATCCGGTTC
CTGGCCGTGT ACTTCCTGTC GATGTTCGCG GGTGCAGTGG CCGTGTTCGT CTTCGGTGCG
GCGGATACGG CCACCGCCGG TGCCTCCGGT GCCATCTACG GGTTGATGGG CGCGGTCCTG
GTCGCGGTGC TGCGATTGCG GCTGAACGCC ACGGCGGCGA TCGGGATCAT CGTCTTGAAC
ATCGTGATCA GCGTGTCGCT TCCCGGGATC TCGTTGTTGG GGCACCTCGG TGGCCTGGTG
GCGGGGGCGT TGGCGATGAT CGCGATGGTG TTCGCGCCGG AGAGGAACCG GGCCGCTTAC
CAAGCCGGTG CGGTGGCGAT CATGGCCGCC GCCTTGGCGG GACTCGTGGT GTACCGCGAC
GCCGAGCTTT TCGACCAGCT GTGTTTTCAC CCGGTGTTGT GCGGGTTCTG A
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| Protein sequence | MVSNHEVTDV GRECRSVDNT VTEPPNPPPY GQSQQQEALP GCWWHPGRQT GLRCVRCDRP
ACPDCLREAS VGHQCIDCVT SARQQQRAQA EAYRRAGYGA RTVVGARVPQ RVVVVPLLIA
INVVIYALTA FQAGSVMDNH LSPVFEDGVL WPVAVVLFDE WWRLLASGFL HYGLLHLAMN
MLALWVLGRD LELLLGRIRF LAVYFLSMFA GAVAVFVFGA ADTATAGASG AIYGLMGAVL
VAVLRLRLNA TAAIGIIVLN IVISVSLPGI SLLGHLGGLV AGALAMIAMV FAPERNRAAY
QAGAVAIMAA ALAGLVVYRD AELFDQLCFH PVLCGF
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