Gene Svir_00230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00230 
Symbol 
ID8385361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp21087 
End bp21509 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content65% 
IMG OID644974127 
Productprotein of unknown function (DUF2020) 
Protein accessionYP_003131940 
Protein GI257054108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.218837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGAGC TGACCCTGCC ACCGGAGCCC GAACCCGAGA ACGCGGGGCC GTGTCCCTAT 
CTCGACACGG AATTCGTGGC CGAGTTCAAC GGTCAGCGGG TCGGCGAGGT GAAGACGTCC
TCTGAGGAGC CTCATCCGAC GTGTTTCTTC TACCGGCCCG ACGGCGATCT CCAGCTGCAG
GTCCGGGTAT ACGTCGGGGA GGAGGACGTG GCCCGGGCGC TGGTCGACGC GGCGGCACCC
GTCGAGACGT CGAATCCCAC GTCGCAGCCC ACCGGATGGG AGGGCGGTTA CGAGTCGAAT
GACGACGGTG CGGTGTACGC CGTTTTCAAG GGGGGCAACG CCGTTGTCGT CACCACGAAT
CAACCCCAAA GTGTGAAGGC GCGAACTGTG GCGACGGAGG CCATTGCCAA CTTACGGATC
TGA
 
Protein sequence
MSELTLPPEP EPENAGPCPY LDTEFVAEFN GQRVGEVKTS SEEPHPTCFF YRPDGDLQLQ 
VRVYVGEEDV ARALVDAAAP VETSNPTSQP TGWEGGYESN DDGAVYAVFK GGNAVVVTTN
QPQSVKARTV ATEAIANLRI