Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_00230 |
Symbol | |
ID | 8385361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 21087 |
End bp | 21509 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644974127 |
Product | protein of unknown function (DUF2020) |
Protein accession | YP_003131940 |
Protein GI | 257054108 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.218837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGGAGC TGACCCTGCC ACCGGAGCCC GAACCCGAGA ACGCGGGGCC GTGTCCCTAT CTCGACACGG AATTCGTGGC CGAGTTCAAC GGTCAGCGGG TCGGCGAGGT GAAGACGTCC TCTGAGGAGC CTCATCCGAC GTGTTTCTTC TACCGGCCCG ACGGCGATCT CCAGCTGCAG GTCCGGGTAT ACGTCGGGGA GGAGGACGTG GCCCGGGCGC TGGTCGACGC GGCGGCACCC GTCGAGACGT CGAATCCCAC GTCGCAGCCC ACCGGATGGG AGGGCGGTTA CGAGTCGAAT GACGACGGTG CGGTGTACGC CGTTTTCAAG GGGGGCAACG CCGTTGTCGT CACCACGAAT CAACCCCAAA GTGTGAAGGC GCGAACTGTG GCGACGGAGG CCATTGCCAA CTTACGGATC TGA
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Protein sequence | MSELTLPPEP EPENAGPCPY LDTEFVAEFN GQRVGEVKTS SEEPHPTCFF YRPDGDLQLQ VRVYVGEEDV ARALVDAAAP VETSNPTSQP TGWEGGYESN DDGAVYAVFK GGNAVVVTTN QPQSVKARTV ATEAIANLRI
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