| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00030 |
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| Symbol | |
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| ID | 8385341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3934 |
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| End bp | 4827 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974109 |
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| Product | 6-phosphogluconate dehydrogenase-like protein |
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| Protein accession | YP_003131924 |
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| Protein GI | 257054092 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
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| TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000184369 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.343004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGC TTGGTCTCAT CGGCCTGGGC AAGATGGGCT TCAACATGCG GGAACGCCTG
CGGGAAGCCG GCCACCGGGT GGTGGGGTAC GACCGTAACG CCGAGGTGAG CGACGTCGCG
TCGTTGGCCG ACCTGGTGGC CGCGCTGGAG GCGCCCCGGG TGGTGTGGGT GATGGTCCCG
GCCGGCGCGG CGACGCGGCA GACCATCACC GAGCTCGCCG AGTTGCTCGA CGAGGGTGAT
CTGGTGATCG AGGGCGGGAA CTCCCGCTAC ACCGAGGACG CTGAACACGC CGAGCTGCTC
GGCCGCCGGG GGATCGGCTA CCTCGACGTC GGTGTCTCCG GCGGGGTGTG GGGCAAGGAG
AACGGTTACG GCCTGATGGT CGGTGGTTCC ACGGCCGATG TGGAACGCGC GATGCCGTTT
TTCGACGCGC TTCGCCCGGA GGGGCCTCGC GAGGAAAGCT TCGTCCACGC GGGCGGGGTC
GGTGCCGGGC ATTACGCGAA GATGGTGCAC AACGGCATCG AGTACGGACT CATGCAGGCG
TACGCCGAAG GTTTCGAACT GCTCGAGGCC TCCGGGGTCG TGCAGGACGT CCCCGGAGTG
CTCAAGGCGT GGCAGCGTGG GACGGTCGTG CGGTCCTGGC TGTTGGAGTT GCTGGTCGAG
GCGTTGGAGA ACGACCCTGA GCTGGCGGAA CTCGAAGCCT ACGTCGAGGA CTCCGGTGAG
GGGCGGTGGA CGCTGGAGGA GGCCATCGAC AACGCCGTAC CCGCACCCGT GATCTCGGCG
GCGCTGTTCG CGCGGTTCGC CTCTCGACAG GAGAATTCGC CCGCGATGCG TGCGGTCGCG
GCGCTGCGGA AGCAGTTCGG CGGGCACACG GTGAAGACGA AGGTCACTGA TTAG
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| Protein sequence | MAQLGLIGLG KMGFNMRERL REAGHRVVGY DRNAEVSDVA SLADLVAALE APRVVWVMVP
AGAATRQTIT ELAELLDEGD LVIEGGNSRY TEDAEHAELL GRRGIGYLDV GVSGGVWGKE
NGYGLMVGGS TADVERAMPF FDALRPEGPR EESFVHAGGV GAGHYAKMVH NGIEYGLMQA
YAEGFELLEA SGVVQDVPGV LKAWQRGTVV RSWLLELLVE ALENDPELAE LEAYVEDSGE
GRWTLEEAID NAVPAPVISA ALFARFASRQ ENSPAMRAVA ALRKQFGGHT VKTKVTD
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