Gene Suden_1926 details

Gene Information

• Locus tag: Suden_1926
• ID: 3763047
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurimonas denitrificans DSM 1251
• Kingdom: Bacteria
• Replicon accession: NC_007575
• Strand: +
• Start bp: 2008143
• End bp: 2010236
• Gene Length: 2094 bp
• Protein Length: 697 aa
• Translation table: 11
• GC content: 30%
• Product: PAS/PAC sensor signal transduction histidine kinase
• Protein accession: YP_394435
• Protein GI: 78778120

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTTT TAAACATCAG ATACAAACTT CTATTTTTAT CTATCATCCC CACGCTCTTA 
ACTCTGTTGC TATTTTTTAT GATTCTATCA CAGAGTCTAA GTGAAAAAAA TAATTTTGAA 
CTTACAAAAG GATATATCCT AGAATCAATA GCAATTTCAA AAATTGTTCA TGCTATGCAG 
ACAGAAAGAG GACTAAGCAG TGGTTTTTTA GCAAAAAATG AACTAGATAA ACAAGATACA 
AACCTCCTCT TAGCGAGAGA TGCTCTAAAC AAAGCACTAG ATAATGCTAA ATATATCTAC 
AAGAAGAAGC AACTAAAAGA TAAAACTATA TTAAATCTAC TAAACGAGAT AGATGTCACA 
AGAAAAAATA TGGATTTGAA AACTAAGTCC ATAGCTTATA TAAAAGATTA TTACTCTCAA 
AAAATAGAGC TGCTTTTAAG TTATGTTGCT ACTATACCAA CCTTTATGAA CGATAAAGAA 
AGCAGAAATT TTGTACAAGC ATTAGTTTAT TTATCTAGTG CAAAAGAGTC TCTTGGGATT 
ATCCGAGCTA CTCTAAATAA AGTTTTTATA GAAAATAAGA TTTTGATTGA TGATTATTCA 
ACTATTAAAG GCTCTTTAAA AAACTACAAT CACAATATTG ATGCGTTTAA GAGCACTATT 
ACCGAGGACT TTTTAAAAGA GTTTGAAGAA ATTTTTAAAG GCAAGAACAT AGATAATACA 
TTTGCGATAA TTGATGATAG TCTTGCAAAT TCAAAAAACA ATATAGATTT TGCAACAAAT 
CCTGACTATT GGTTTGAACA AGCTTCTCAG ACTATAAATC TTTTAAATAG TGTTGAAAAT 
GCTCTATTTC ATGAAATAGG GAATATTATA GATGAAAAAT TAAACTCTAT TTTTTATAAA 
TTAGCTCTAA TTGTTATACT CTCAACTATT GGGATTATTG CGCTCATAAG CATAACTTTT 
AGTTTTGTAA AAAATATTTT AACTTCTACA AACAAATTAA ATGAGGAGTT CTCAAACTCA 
AAATCTCTGC TTGAGCAATA CAAATCAAGT GTAGATAGAA GTTTCATAGT CTCAAAAACA 
GACAAAAAAG GGGTAATCAC CTACGCAAAC GATGAGTTTT GCAAAATTTC TGGATACTCA 
AGAGATGAGC TAATTGGAAA ATCTCACAAT ATAATAAGAC ATCCTGATAC AGAAATGGCG 
ATTTTTAAAG AGTTGTGGCA CACCATAAGA GATAAAAAAG AGCCATGGTT TGGTGAAATC 
AAAAATCTAA AAAAAGATAA ATCATCATAT TGGACAAAAG CAGTCATAAA TCCAATACTC 
GACTCAAATC AAAATATAAT TGAGTATATT GGGATAAGAA CAGATATAAC CGAACTTGAA 
AATGCAATGA TAGCAGCCCT TAGTGCAGAA AAAGCAAAGA GTACTTTCTT GGCCACAATG 
AGCCATGAAC TTAGAACTCC ATTAAATGCT GTTATCGGTT TCTCTCAAAT TTTAATGGCT 
AAAGATGATA TGCCTAAAGA GAAGATAAGA ACTTTTGTAG AAAAAATCAA TATCTCAGGC 
AAACATCTGC TCAATCTAGT AAACAATATC CTAGACTTCT CAAAGATAGA ATCAGGCAGA 
ATGAATCTTA ACAAAAGAGA GATTTTGTTG GAAAATTTTA TTAATGAGAC TATTTTGCTA 
GTAGAAAATG AAGCTCTAAA AAAAGATATT GAAATCATAA AAAAAGGCTT TTTTGAGATT 
AGTTTGAGTG CTGATGAGCA ACTTCTAAAG CAGGTTATTT TAAATATTTT ATCAAATGCC 
ATCAAATTTT CAAATCAAAA TTCTGCCATT AATATCTCAT ATAAAAATGA TGAAGAGAAC 
CATATCATCT CAATTTGCGA TGAAGGAGTA GGATTATCAC AAGAGCAGCT TGAAAAATTA 
TTTAAGCCTT TCTCTCAGGT ACAAGAGCAT CAAAACACTG CCCTTAAAGG CACTGGACTA 
GGACTTGTTA TATCTCAAAA AATAGTAGAG CTTCATAATG GAAACATAGA AGTCAAGACT 
CAATCAGGAA AAGGTAGCTG TTTTTACATA AGCATACCAA TCATAAAGGC ATAA 

 

Protein sequence

MNFLNIRYKL LFLSIIPTLL TLLLFFMILS QSLSEKNNFE LTKGYILESI AISKIVHAMQ 
TERGLSSGFL AKNELDKQDT NLLLARDALN KALDNAKYIY KKKQLKDKTI LNLLNEIDVT 
RKNMDLKTKS IAYIKDYYSQ KIELLLSYVA TIPTFMNDKE SRNFVQALVY LSSAKESLGI 
IRATLNKVFI ENKILIDDYS TIKGSLKNYN HNIDAFKSTI TEDFLKEFEE IFKGKNIDNT 
FAIIDDSLAN SKNNIDFATN PDYWFEQASQ TINLLNSVEN ALFHEIGNII DEKLNSIFYK 
LALIVILSTI GIIALISITF SFVKNILTST NKLNEEFSNS KSLLEQYKSS VDRSFIVSKT 
DKKGVITYAN DEFCKISGYS RDELIGKSHN IIRHPDTEMA IFKELWHTIR DKKEPWFGEI 
KNLKKDKSSY WTKAVINPIL DSNQNIIEYI GIRTDITELE NAMIAALSAE KAKSTFLATM 
SHELRTPLNA VIGFSQILMA KDDMPKEKIR TFVEKINISG KHLLNLVNNI LDFSKIESGR 
MNLNKREILL ENFINETILL VENEALKKDI EIIKKGFFEI SLSADEQLLK QVILNILSNA 
IKFSNQNSAI NISYKNDEEN HIISICDEGV GLSQEQLEKL FKPFSQVQEH QNTALKGTGL 
GLVISQKIVE LHNGNIEVKT QSGKGSCFYI SIPIIKA