Gene Suden_1817 details

Gene Information

• Locus tag: Suden_1817
• ID: 3762804
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurimonas denitrificans DSM 1251
• Kingdom: Bacteria
• Replicon accession: NC_007575
• Strand: -
• Start bp: 1899007
• End bp: 1900929
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 38%
• Product: NADH dehydrogenase subunit L
• Protein accession: YP_394326
• Protein GI: 78778011

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000815464
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTAT TTTTATATAC AGCACTTTTC TCACCACTTG TTGGTTCTTT GTTTGCAGCA 
CTTTTTGGGG CTTCACCAAA GACAAAAATA GCTGGAATTG TACCTAGTGC GCTTCTTGGG 
GTATCTCTTA TTAGCAGTAC TATTTTACTA ATATTAGTAT TTACAACAGG ACATACGCTA 
CATGTAGAGA TGATGACATG GATGGCTACG GGAGATTTAT ATATTCCTTT TGGCTTTGTA 
GTTGATCAGG TAAGCGTGGT TATGATGATG GTTGTAACAT TGGTTTCAAC TGTTGTTCAT 
GTTTACGCTA TTGGTTATAT GGACCATGAT AAAGGCTTTA ACAGATTCTT CTCTTACCTT 
TCTGCTTTTG TTTTCTCTAT GATGATACTT GTTATGAGTG ATAACTTTGC AGGTCTCTTT 
ATCGGTTGGG AAGGTGTAGG GCTTTGTTCA TGGTTACTAA TTGGTTTTTG GTATCACAAA 
GAGAGTGCGT CTTGGGCAGC TAATGAAGCG TTTATCATGA ATCGTATTGC TGACCTTGGG 
ATGTTAATTG GCATCTTCTT GGTTTACTGG AACACAGGGA CACTACAATA TGATGGTGCT 
TTTGCAGCAA TGCCATCACT TGATACTGCT ACTATTACAT GGATAGGAAT CTTCTTATTT 
ATTGGAGCTA TGGGTAAATC TGCACAGTTT CCACTTCACA CTTGGTTAGC AGATGCTATG 
GAGGGACCAA CTCCAGTATC AGCGCTAATT CACGCAGCAA CTATGGTTAC AGCTGGTGTT 
TATTTGGTAG TTCGCTCAAG CCCTCTTTAT GAGCTAATCC CTAATGTAGG GCTATTTATT 
GCAAGTCTTG GAGCATTTGT TGCTCTTTTT GCAGCATCTA TGGCGTTAGT TAATCGTGAT 
ATGAAAAGAG TTATTGCATA CTCTACACTC TCACAGCTAG GTTATATGTT TGCTGCTGCT 
GGGCTTGGAG CTTATTGGGT AGCACTTTTT CACCTTATGG CTCACGCATT CTTTAAAGCG 
CTTCTATTCT TGGGTGCAGG AAATGTTATG CATGCTATGC ATGATGAGTT GGATCCGTTT 
AAAATGGGTG GATTAAACAA GGTAATGAAG GGCACATTTT TAATGATGAC CATAGCTTCA 
GTGGCACTCG CTGGAATCTT TCCGCTAGCT GGATTCTTCT CAAAAGATTT AATTTTGGAA 
GTAGCTTTTG TTAATCATCA CTATGTAATC TACGCAGTGC TTCTATTTAC TGCAGCGCTT 
ACAGCATTTT ACTCATTTAG ACTTGTTGCA CTAATATTCC ACGGAGAGGA GAGATACAAA 
CTATTTGGTA TTCATCCACA TGAAGCGTAC AAGTTTATGT TAATAGCTAT GAGTCCACTT 
CTTCTTTTAG CAATTATTGC AGGAGCATTC AAAGCTGGAT ATTTCGAGAT GGTTACGCAG 
CTTTTACCTT CTACTGAGTA CCATGTTCAC TCTGCTGCAA CTTACTGGAT TATGACAATA 
GGAACTCAAC TTCTTGTTGC CTTGGCAATT TTTTATGCAT ATAAAAAATA TACAAAAAAA 
GATATAAAAG TACCAGATGG AACTTCTAAA ATGGAGAATA GTTTTGTATA TAAACTTCTT 
ATTAACCAAT ACTACATCCC ATATTTTTAT GAACAGTATA TAGTTAAGGC ATATAGAGAG 
CTATCAGAAG TTTTCTGGAC AAAAATAGAC CAAAAAATTG TAGATGGAAC TGTTGATGGT 
ATGGCAAATA TACTTTATAA AACAGGAAAT ACAACAAGAG TTATGCAGAG TGGAAATCTT 
TCTACCATGC TAAAATGGAT GGTAGCAGGA ACTGTTGCTT TACTATCACT AGCTGTAGTT 
TTTGGACTAG CGGCTAGATA TTCTGGAGAA ATTAAGACAA TTCTCTCAGG TTTAGGAGTT 
TAA 

 

Protein sequence

MELFLYTALF SPLVGSLFAA LFGASPKTKI AGIVPSALLG VSLISSTILL ILVFTTGHTL 
HVEMMTWMAT GDLYIPFGFV VDQVSVVMMM VVTLVSTVVH VYAIGYMDHD KGFNRFFSYL 
SAFVFSMMIL VMSDNFAGLF IGWEGVGLCS WLLIGFWYHK ESASWAANEA FIMNRIADLG 
MLIGIFLVYW NTGTLQYDGA FAAMPSLDTA TITWIGIFLF IGAMGKSAQF PLHTWLADAM 
EGPTPVSALI HAATMVTAGV YLVVRSSPLY ELIPNVGLFI ASLGAFVALF AASMALVNRD 
MKRVIAYSTL SQLGYMFAAA GLGAYWVALF HLMAHAFFKA LLFLGAGNVM HAMHDELDPF 
KMGGLNKVMK GTFLMMTIAS VALAGIFPLA GFFSKDLILE VAFVNHHYVI YAVLLFTAAL 
TAFYSFRLVA LIFHGEERYK LFGIHPHEAY KFMLIAMSPL LLLAIIAGAF KAGYFEMVTQ 
LLPSTEYHVH SAATYWIMTI GTQLLVALAI FYAYKKYTKK DIKVPDGTSK MENSFVYKLL 
INQYYIPYFY EQYIVKAYRE LSEVFWTKID QKIVDGTVDG MANILYKTGN TTRVMQSGNL 
STMLKWMVAG TVALLSLAVV FGLAARYSGE IKTILSGLGV