Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_1707 |
Symbol | |
ID | 3762656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | - |
Start bp | 1788071 |
End bp | 1789861 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | Type I secretion system ATPase, PrtD |
Protein accession | YP_394218 |
Protein GI | 78777903 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA TAGCACAAAA TAGGCAAAAA CCGACAAACT CAGAACTCAA AGAGGCTATT TTAGCATCTA AAAAATCATT TATAATAGTT GGTTTTTTTA GTATGTTTAT AAATATACTT ATGCTCGTTC CATCACTCTA CATGTTACAG CTCTATGATA GAGTTTTAGC AAGCAGAAGC GAGGGCACTC TTTATATGCT TACGGCAATT GTAGTTGTTC TGTTTATAAC GATGGCACTA CTTGAGGTAG TACGCTCAAA AATACTTGTA AAAGTTGGTA ATAAACTTGA TGCACTTCTT AGTAAAAGGG TTTTTGATTC ACTCTTTGAA GTAGCAAACA AATACCCTGG AAAAGCCTCC TCAATGCCGC TAAATGATTT AACTTCAATT AGACAGTTCA TGACAGGTAA TGGACTTTTT GCCTTTTTTG ATGCTCCTTG GATACCGATT TATATAGCAG TACTTTTTAT GTTCCATCCA ATTTTCGGAT ATTTTGCAAT TTTTGCGGCT ATTGTTTTGA TAGCGTTTAC GATAATTAAC GAATACTCAA CAAAAGAGAA ACTCTTAGAG GCAAATAATT TAAGCAGAGC ATCTAATATA TATGTAGATT CAAATATAAG AAATGCAGAA GTTATAAATG CGATGGGCAT GAAGGGCAAT ATCTTAGGGA TATGGCAAGA GAAGTATTAC GGTTTTTTAA ATGCACAAAA CAGTGCAAGC AATAAAGCTG GAATCTGGGC TAACATGTCA AAAAGCGCAA GAATGCTTTT TCAGTCTCTT ATCTTAGGTA TCGGTGGATA TCTTGCTATA AAAATGGAAG TAAGTGCTGG TATGATGATA GCAGGTTCTA TTATCATGGG TAGAGCATTG GCTCCACTTG ATTTGATTAT TGGTAGTTGG AAAGGCTTTA GTGCAGCTAG AACATCTTAT GAGAGATTGG ATGCACTCTT GAGTGAATTT CCAAAAGAAA AAGAGTATAT GGAACTTCCT GCTCCAGAGG GTGAAGTGCT TTTAGAGGGA GTTGTTGTTG TTCCTCCAGG TGCTACTCAG CCATCAATTC GTGGCATTTC AATGCTGATA AATAAAGGTG ATGTTGTTGG TATAGTAGGA CCAAGTGCTG CTGGAAAATC ATCTTTAGCT AGAATTATCT TAGGTTTATG GCCTTTAGCT GCAGGAAAAG CAAGACTAGA TAAGGCAGAC ATCTCACAAT GGGACAAAGC AGATTTAGGG AAGTATATAG GCTACCTGCC TCAAGATATA GAACTTTTTG AAGGAACAGT CAGCCAAAAT ATAGCAAGAT TTACTGATGT TGATTCGGTT AAAGTAGTTG AAGCTGCTCA AAAAGCTGGT ATTCATGAGA TGATATTAAG GCTTCCTGAG GGGTATGATA CTAGAATTGG TGTTGGCGGT GCAACACTCT CAGGTGGTCA AAGACAACGC ATAGGTTTTG CTAGAGCTAT CTATGACAAC CCTGTTTTAG TAGTACTTGA TGAGCCAAAC TCAAATCTTG ATGATCAAGG TGAAGCGGCA CTAGTTAAAG CGATACAATC TTTAAAAGAG AGTAATACGA CTGTTATTCT GATAACTCAC AGACCAAACA TACTACAAGT TACAAATAAA CTCGCTGTTA TAAAACAGGG TCTTTTGGAA GCTTATGGCA ACACTAATGA GGTACTCTCA AATATGGCTG CCGCGGTAAA AGATGCTCAG GCACAAGCGC AGGCTCAGAC GCAGGCTCAA GCTCCCATGA CGCAAGCTCC GAAAATATCG TTAAGCAAAC CAAGTAGTTA G
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Protein sequence | MAKIAQNRQK PTNSELKEAI LASKKSFIIV GFFSMFINIL MLVPSLYMLQ LYDRVLASRS EGTLYMLTAI VVVLFITMAL LEVVRSKILV KVGNKLDALL SKRVFDSLFE VANKYPGKAS SMPLNDLTSI RQFMTGNGLF AFFDAPWIPI YIAVLFMFHP IFGYFAIFAA IVLIAFTIIN EYSTKEKLLE ANNLSRASNI YVDSNIRNAE VINAMGMKGN ILGIWQEKYY GFLNAQNSAS NKAGIWANMS KSARMLFQSL ILGIGGYLAI KMEVSAGMMI AGSIIMGRAL APLDLIIGSW KGFSAARTSY ERLDALLSEF PKEKEYMELP APEGEVLLEG VVVVPPGATQ PSIRGISMLI NKGDVVGIVG PSAAGKSSLA RIILGLWPLA AGKARLDKAD ISQWDKADLG KYIGYLPQDI ELFEGTVSQN IARFTDVDSV KVVEAAQKAG IHEMILRLPE GYDTRIGVGG ATLSGGQRQR IGFARAIYDN PVLVVLDEPN SNLDDQGEAA LVKAIQSLKE SNTTVILITH RPNILQVTNK LAVIKQGLLE AYGNTNEVLS NMAAAVKDAQ AQAQAQTQAQ APMTQAPKIS LSKPSS
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