Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_1575 |
Symbol | secD |
ID | 3763169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | - |
Start bp | 1650682 |
End bp | 1652247 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | preprotein translocase subunit SecD |
Protein accession | YP_394087 |
Protein GI | 78777772 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTTA ATTATCGCAT AGTAATATTT GCTTTTGCAA TAGTTTTTGG TCTTTTTTTC TCTCTTCCAT CAATCCTTCA AACACAAGAT GGTAAAAAAA TAACATTAGG ACTCGACCTT CAAGGCGGTC TGCATATGCT TCTTGGTGTA AAAACCGAGG AAGCTGTGAA ATCTCGCATA AAATCAATTG CAGCTAGTGT TAAATACTAT AGCGAAAAAG AGGAGATTCT TATAGATTCT CTCTCTTTTG ATGAGAGTAG TATTTCGTTT TTACTTCTTG ATAAAGATGA CTTAAAGAAA ATCAAATCTT TTTTGCATGA GATAAAAGGT GCAGTTGTTG TTGCTACTGG AGAGAGCATC TCTTTGACTC TAACTCCTGA GGAGATTGCT AGAACAGAAG AACAAGCAAT TTCTCAAGCA ATAGAGACAA TAAGAAACAG ACTAGATCAG TTTGGATTAA CAGAGCCAAT CGTTGCACGT CAAGGTGAGG AGAAGATACT TGTTCAATTA GCAGGCATTA AAACCGCAGA GGATGAACAA CGTGCTCGTG AGCTTATCTC TCGTTCAGCA AAGTTAGAGC TTATGGCAGT TGATGAAGAT AGAAATGCAA GAGTAAATAG CATGAGCAAT AGCGATGCTG TCTCTTATGG AGATGTTATT TTAGAGGATG TAACAAATCC ACATATGAAA TATCTTGTTC GTGAAATTCC AATTCTTGAT GGTGGAATGC TTACAGATGC AAACGTTGGT TTTGATCAAA ATAATCGTCC TCTTATAACT TTTAAGTTAA ATGCAGAGGG TGCTCAAATA TTTGGAGATT TTACTGCAAA GAGTGTTGGA AAACGTTTGG CTGTTGTTCT TGATGGTAAA GTTTATTCAG CACCAGTAAT CAATGAGAGA ATCGGTGGCG GAAGTGGTCA AATCTCTGGA AACTATACAG TTATGGAAGC AAAAGATTTA TCAATAGCTC TTCGTTCGGG CTCTCTTTTA GCTCCAATTT ATCTGATGGA GAAGCGTTCA GTTGGTCCTA GTTTGGGTGC TGATAGCATT AAAGCAAGTA TGATTGCACT TATTGGCGGG TTTGCTCTTG TTATAGGTTT TATGGTTGTA TATTACAGAA TGGCTGGAAT AATCTCAAAT ATTGCATTGA TTGTAAATAT TTTGATAATA CTCTCCGTCA TGAGTCTCTT TGGAGCAACG CTTACTCTGC CTGGAATGGC TGGTATAGTT TTAACTGTCG GTATGGCAGT TGATGCAAAT GTTATTATTA ATGAGCGTAT TCGAGAGCTT CTTCATCAGG GCTACTCTAT ACAAAAAGCC ATAGAAGAGG GCTACGCAAA TGCAATGCGT GCGATTTTGG ATGCAAATAT TACAACACTC ATTGCAGCGG TAGTTTTATA TGCTTATGGA ACAGGGGCTA TCAAGGGATT TGCTGTAACC ATAAGTATAG GTATTTTGGC TTCAATGCTA ACGGCAATAT TAGGAACTCA TGGAATCTAT GAGATGCTTC AAAACAGAAT CCAAAAAAGT AAAAACAACC TCTTTTGGTT TGGGATTAAG GGGTAA
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Protein sequence | MKLNYRIVIF AFAIVFGLFF SLPSILQTQD GKKITLGLDL QGGLHMLLGV KTEEAVKSRI KSIAASVKYY SEKEEILIDS LSFDESSISF LLLDKDDLKK IKSFLHEIKG AVVVATGESI SLTLTPEEIA RTEEQAISQA IETIRNRLDQ FGLTEPIVAR QGEEKILVQL AGIKTAEDEQ RARELISRSA KLELMAVDED RNARVNSMSN SDAVSYGDVI LEDVTNPHMK YLVREIPILD GGMLTDANVG FDQNNRPLIT FKLNAEGAQI FGDFTAKSVG KRLAVVLDGK VYSAPVINER IGGGSGQISG NYTVMEAKDL SIALRSGSLL APIYLMEKRS VGPSLGADSI KASMIALIGG FALVIGFMVV YYRMAGIISN IALIVNILII LSVMSLFGAT LTLPGMAGIV LTVGMAVDAN VIINERIREL LHQGYSIQKA IEEGYANAMR AILDANITTL IAAVVLYAYG TGAIKGFAVT ISIGILASML TAILGTHGIY EMLQNRIQKS KNNLFWFGIK G
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