Gene Suden_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_1343 
Symbol 
ID3763473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp1415164 
End bp1415874 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content38% 
IMG OID 
Producthemolysin A 
Protein accessionYP_393856 
Protein GI78777541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.070329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCAGGC TTGATAACTA TCTGGTAGAA AATGGACAAT GCGAGAGTAG AAACAAAGCG 
CAAAACATCA TAAAAGAGGG ACTTGTAAGC GTAAACGGCG AGCAGATAAT CAAGAGTTCG
TATGCCCTAA AAAGTAGCGA TAAAGTTGTA GTAAAAGAGC ATAAAGAGTA TGTCTCCCGC
GCAGCTTTTA AGCTTAGTGC TTTTTTAGGC GAGTTGTCTC TTAATCTAAA AGATAAAACA
GCCCTTGACA TCGGCTCTTC AACTGGTGGT TTTACGCAGG TTTTACTAGA AGAGGGTGCA
AAAGAAGTAA CCGCTGTAGA TGTTGGACGT GAGCAGTTAC ATGTAAGCCT AAAAAATGAT
GCAAGAGTCC ACTCTTACGA GGAGTGCGAC ATAAGAGAGT TTAAGAGTGA TAAGAGTTTT
GACATAGTTG TAAGTGATGT CGCTTTTATC TCTCTGCTAT ATATTTTAGA TGATGTAGAT
AGACTCTCGC ATGACAAAAT TATTCTGCTC TTTAAACCAC AGTTTGAAGT AGGACGAGAA
GCAAAAAGAG ACAAAAACGG TGTAGTAACG GATGAGAAAG CAATACTTCA AGCGATGATA
AAGTTTGAAG ATACATGTAA GTTAAAGGAT TGGAAATTGC TTAAAAAATC TCCGTCAAAG
ATTACTGGCA AAGAGGGAAA TCTGGAATAC TGTTACCTTT TTGAGAAGTA A
 
Protein sequence
MSRLDNYLVE NGQCESRNKA QNIIKEGLVS VNGEQIIKSS YALKSSDKVV VKEHKEYVSR 
AAFKLSAFLG ELSLNLKDKT ALDIGSSTGG FTQVLLEEGA KEVTAVDVGR EQLHVSLKND
ARVHSYEECD IREFKSDKSF DIVVSDVAFI SLLYILDDVD RLSHDKIILL FKPQFEVGRE
AKRDKNGVVT DEKAILQAMI KFEDTCKLKD WKLLKKSPSK ITGKEGNLEY CYLFEK