| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_0802 |
|---|
| Symbol | |
|---|
| ID | 3764246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | - |
|---|
| Start bp | 831907 |
|---|
| End bp | 833580 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | DnaB-like helicase-like |
|---|
| Protein accession | YP_393316 |
|---|
| Protein GI | 78777001 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.507024 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATG AACATAATTT TAATACAAGC ATAGAAAAAA GCATTTTAAG CTCAATACTC
TTTGAGCCTC AAAAATTACA GGACATCTCA AATATATTAA ATGTAGAGGA TTTTTATCTT
CAGGCTCATC AACTCATCTA TGATTCAATG CTCAAGCTAA ACAAACAAGA TCTGCCGATA
GATGAAGAGT TTTTAAAAAA GAAGTTCCCA AAAATCGACG ATGGTGTGAT GCTTGATATT
TTGGCAGCTA ATCCTATCTC AAATATTTTA GCATACGCTA AAGAGCTAAA AACAGATGCT
ATTAATAGAC AAATTACATT AGTCGGCAGT AAAGTAGCCC ACGGGGATTT AGCAGCTATA
AATGAGCTTA TTGGCTTACA AGAGAGATTA AACACTGTTG ATGGCATTAA GCAGCTAAAA
AGAGATGATA AAACCTTCAA TAGCATTTTT GATAAGTTTG ACATCGATTT TGAAGAAATT
GAAAATGTCA AATTCGAATA CCTGATGGAT AATTTTTTAG TTAAAAATGA AATAACAATG
ATAAGTGCTC GTCCTGGAAC TGGTAAAAGC TTACTGAGTG TTGCAGCTGC TAATATGATG
CTAGGGCAAA AAAATATAGA ACAGGTCTTT TACATTGATG GCGATAATTC TAAATCTACT
CTTAGAGATA GAAACATCCA TCATCTTAAA AAGCAGCATG GTAATAAATT TAGATATTTT
GTAGGATTAA GTAAAAACGA ACTTTGGCAA ATTATAAACA CTTTGAAAAA GATGGATCTA
ACAAACTACT TAGTTGTATT TGACTCTATA AAAAACTTCA TCGCTGGAGA TCGAGACAAA
AACAAAGACG TATCACCTGT AATGGAGATA CTTAGAACTT TAAGAAATAA CGGTGCTACA
GTTCTTTTTC TACATCATCA AAACAAAAAA CAAAAAGATT TTGAGAGTGA TTATGCAGGT
TCATCAGCAT TTGAAGAAGA TACATCAAAT GCATTTACTC TCAAGCGAAA CGATGATAAA
AATTCTTTGA TTTTAAAACC TTTCAAAGCA AGAGCTGGAG ACTTGCAAGA AATAGCATTC
ACATACAATG CTCACAACCA CACTCTTACT AAACTAGACA TAGCTTACGC AAAACAGACT
AAAGAGATGG ATGAGATGAT AAATGAAACG ATAGAGTACT TAAAATCATC TCGAAATAAA
CCAATGTGGT CGGAACTTCA AAAAAACCTT ACAGACTTAG GGTTTGACAA AGAGAAAGCG
GCCAAAGTGA TTAAAAATAA CGAGGGCAAA CTTTGGAACT TTGAGAGAGG AGATAGAAAT
AACCAAAAAC TTTACTTTTT AATAGGTGCA GCTGATAAAA AAGCTGCTGC TGTTGAAACA
GTATATGAAG ATATTGTAAA TACTGCTCCG ATAACTCCGA TAACTCCGAG AAGTCTATTT
TTAGGCACTT CTGAGGGTTT AGCACTTGAT ACAAATAAAA CCGATAACTC CGATAAGTCA
AGCAAAACGC AAAATAGTGA ATATATTGCT CCGATAACTC CGAGAACCTT TAAAATAGGG
GTTTATGAGG GTTTAAATGT AGTTTCCGAT AACTCCGATA ACTCCGATAA CCGAAATGTA
GTATCTGCTT CTCAAAATTT CCCGCGGGAA AAAATAGAAA TGCCAATTTT ATAG
|
|---|
| Protein sequence | MNHEHNFNTS IEKSILSSIL FEPQKLQDIS NILNVEDFYL QAHQLIYDSM LKLNKQDLPI
DEEFLKKKFP KIDDGVMLDI LAANPISNIL AYAKELKTDA INRQITLVGS KVAHGDLAAI
NELIGLQERL NTVDGIKQLK RDDKTFNSIF DKFDIDFEEI ENVKFEYLMD NFLVKNEITM
ISARPGTGKS LLSVAAANMM LGQKNIEQVF YIDGDNSKST LRDRNIHHLK KQHGNKFRYF
VGLSKNELWQ IINTLKKMDL TNYLVVFDSI KNFIAGDRDK NKDVSPVMEI LRTLRNNGAT
VLFLHHQNKK QKDFESDYAG SSAFEEDTSN AFTLKRNDDK NSLILKPFKA RAGDLQEIAF
TYNAHNHTLT KLDIAYAKQT KEMDEMINET IEYLKSSRNK PMWSELQKNL TDLGFDKEKA
AKVIKNNEGK LWNFERGDRN NQKLYFLIGA ADKKAAAVET VYEDIVNTAP ITPITPRSLF
LGTSEGLALD TNKTDNSDKS SKTQNSEYIA PITPRTFKIG VYEGLNVVSD NSDNSDNRNV
VSASQNFPRE KIEMPIL
|
|---|
| |