Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_0437 |
Symbol | |
ID | 3764571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | + |
Start bp | 438775 |
End bp | 440823 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | UvrD/REP helicase |
Protein accession | YP_392953 |
Protein GI | 78776638 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAAA TATTTGAAAA ACTAAATAAT TCGCAAACTG ATGCAGTTAA ACAGACTGAG GGTCCAGTCC TAATCTTAGC TGGAGCGGGG AGTGGAAAAA CTACTACCAT TGTTTCTCGT TTAGCATATC TAATAGAGGG TATTGGAATA CCAGCTTCAA ACACATTAAC TCTTACTTTT ACTAATAAAG CAGCAAAAGA GATGAGAGAA CGTGCTTCTA ACATGATGAG CAATCTTGCT TATCCACCTT TATTGTGTAC GTTTCATAAG TTTGGATTGC TTTTTTTAAA GTTTAACATT CATCTCTTAG GGAGGCAAAA CAACTTTGTA GTAATAGATA GTGATGATAA AAAACGAATT ATTAAAAAGA TAAATAGTGA GCTGGCAACC CCATTGATTG CAAGCGAAAT ATCAAGATAT AAAAACTCTC TTCTTACTCC AGATGATGCC TATAAGCAGG CAGAATTTTT TAATTATCAA CAAATTGCAA AGATTTATGA AGAGTATGAG AACTATCTTT TAGAGAATAA TTTAGTTGAT TTTGATGACT TAATCGCTTT AACTTTTAAA CTTTTAGATG AAAATCCAGA GTTAGCGCGA ACAACTTCAG ATAAGTATCG ATACATCATG GTAGATGAGT ATCAAGATAC AAATGAGCTT CAGCTAAAAC TTCTGCAAAA ACTCTGTAGT ACTCATAACA ACATCTGTGT AGTTGGAGAT GATGATCAGA GTATTTATGG ATGGCGAGGT GCGCATATTA GGAATATCAT GGAGTTTGAT CAGGATTTTA TAGGCACATC TGTTTTTAAA TTAGAAGAGA ATTACCGCTC TCGTGAGCCA ATATTAAAAG TTGCGAATGC TTTGATTGAG CATAATCGCT CACGCTTAGG CAAGAAGCTT ATTCCAACAC GTGGTGGCGG TGAAGATATT ACTATTTTGA ACTCTAGCGA TGAAAATGAA GAAGCAAGAA AGATAGCTAC AAAAGTCAAT AAGCTCTTGG ATTCTGGAGT TAAGGCTGAG GATATAGCAG TTTTATATCG TGTGAATGTT TTAAGTAGAT CAATTGAAGA TGGATTAAAT CGTGCGGGCA TTGCGTATAA ATTAGTTGGC GGACTTAGAT TTTACGATAG AGCAGAGATA AAAGATCTCA TAAGTTATCT TCGTGTTATC ACAAATTTTC ATGATGATTT TTCATTCAAG CGCATAGTTA ATAAGCCAAA GAGAGGCATG GGCAAAGCAA GTGTAGATAA GATAGAGTTA GCGGCACATG CAAATGAGAC ATCAATCTTT GAATATATTG AAAAAATTGC TATCACAGAT TTAGAAACAC TTGTTAAGAG CAAAAATGCA AAAACACTAA AAAAATTTGT AAAAGATATA CGAAGTGTTG CAAATGCAGC AAAAGAGAGC ACCTACAATT TTATAGATAT TTTAGAAGAT ACCTTTCATC TAAAAGATAT CTATAAAGGG CTTCCAGATG AGGTTGAGAG AGTTTTAAAT ATGGATGAGT TCTATGGACT CTTTAGAGAC TTTATAAAAA ATTCTCCATC AGCATCTCTT GATGAGTTTT TAAACGAGCT TACACTTCAG AGTGAGCAAG ATCAAGTTGA GGGCGATAGT ATTTACATGA TGAGTATTCA CGCTTCAAAA GGCTTGGAGT TTGATCATAT ATTTATTATC GGGCTTGAAG AGGGCTTTTT ACCTCTTGTC GGTGATGGAA GTGATTTAGA AGAGGAGAGA CGTCTTGGAT ATGTATCTTT TACGAGAGCA AAAGACACTC TCACACTCTC ACATGTAGAT AGCAGATTTT ACAAAGGAAG AAGAAGCGAT TTGCAAAAGA GCAGATTTTT CAATGAAGCT GGACTCTGTG AGGGCTCTTT AATAGTTGAG AAAAATACAG CCTTTAAAAA AGGTGATTTG GTTCGTCATA AAATATTTGG TACGGGACGA GTAAATGGTG TTAGCAAGTC TGGACGAGAG TTTAAATTAA ATATCAATTT TGCAGGTACA AAACGCGATA TTTTGGCTTC ATTTGTAGAG AGACTATGA
|
Protein sequence | MEKIFEKLNN SQTDAVKQTE GPVLILAGAG SGKTTTIVSR LAYLIEGIGI PASNTLTLTF TNKAAKEMRE RASNMMSNLA YPPLLCTFHK FGLLFLKFNI HLLGRQNNFV VIDSDDKKRI IKKINSELAT PLIASEISRY KNSLLTPDDA YKQAEFFNYQ QIAKIYEEYE NYLLENNLVD FDDLIALTFK LLDENPELAR TTSDKYRYIM VDEYQDTNEL QLKLLQKLCS THNNICVVGD DDQSIYGWRG AHIRNIMEFD QDFIGTSVFK LEENYRSREP ILKVANALIE HNRSRLGKKL IPTRGGGEDI TILNSSDENE EARKIATKVN KLLDSGVKAE DIAVLYRVNV LSRSIEDGLN RAGIAYKLVG GLRFYDRAEI KDLISYLRVI TNFHDDFSFK RIVNKPKRGM GKASVDKIEL AAHANETSIF EYIEKIAITD LETLVKSKNA KTLKKFVKDI RSVANAAKES TYNFIDILED TFHLKDIYKG LPDEVERVLN MDEFYGLFRD FIKNSPSASL DEFLNELTLQ SEQDQVEGDS IYMMSIHASK GLEFDHIFII GLEEGFLPLV GDGSDLEEER RLGYVSFTRA KDTLTLSHVD SRFYKGRRSD LQKSRFFNEA GLCEGSLIVE KNTAFKKGDL VRHKIFGTGR VNGVSKSGRE FKLNINFAGT KRDILASFVE RL
|
| |