| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Suden_0332 |
|---|
| Symbol | murE |
|---|
| ID | 3764723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurimonas denitrificans DSM 1251 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007575 |
|---|
| Strand | + |
|---|
| Start bp | 332164 |
|---|
| End bp | 333465 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
|---|
| Protein accession | YP_392848 |
|---|
| Protein GI | 78776533 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.870436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAATTG AGATACCAGA TGAAGCTTTT AGATATATAA CTGAAAACTC ACAAGAGTGT
GATGCAGATA CAGCTTTTGT TTTAACTCCA CAAAATGAAA AATATCTTCA AAATGCAAAA
GATAATGGCG CACACTCAAT CATAAATATC AAAGATGTAG CAAAGTTATT TGGTATTGAG
AAGATAAAAA TTGTAGGTAT TACAGGAACA AACGGCAAAA CCACGACGGC TAGTGCGATA
TACTCGTTTT TGCTCGATTT AGGTTACAGA GTTGCTATGC AAGGAACTCG TGGTTTTTTT
ATGAACGACA GAGTGATAGA AGAAAAAACT TTAACAACAC CATCACTCTT AAATACATAT
AAACATATTT ACCAAGCTGT GAGTGAAAAG TGTGATTTTT TTATTATGGA AGTAAGTTCT
CATGCTATCG TACAAAAGAG AGTAGAAGGT CTTAACTTTG AACTTAAAAT TCTTACAAAC
ATTACACAAG ATCATCTTGA TTTCCATAAA ACATTAGGCG AATATATCGC AGTAAAAAAC
AGCTTTTTTC AAGATGATGG TAGAAAACTC ATAAACAAAG ATGAGACAAA ATCATCATTT
AATTTTAAAA ATACCTTTAC TTACGGTATA GAAAATTCAG CAACTTATAG ACTAATAGCA
TATTCGCTAA ATAATGCATC GAGTGGAATT ATTCAACATT TTAGCGAAGT AGTTCCTTTT
ACATCTTCAT TGCATGGCTT CTTCAATCTA TACAATCTTA TGGCAGCAAT TGCAGCAACA
CATCTACTAA GTGGTAAAAA ATTAGAAGAA GTAACTGCAG TAGTAGATAA TTTCGCTGGT
GTTAGTGGAA GAATGGAACA AGTTAGTGAG AGCCCAAATG TTATAGTTGA TTTTGCACAT
ACTCCAGATG GGATACAACA AGTCTTAAAT GCATTAAAAG AGAAAGAACT TTTAGTAGTT
TTTGGAGCTG GCGGAGATCG AGATAGAACA AAAAGACCTT TGATGGGCAG AGTTGCGGCA
AGTTTGGCAA AGAAGTTGTA CATCACAAGC GATAATCCAA GAACTGAAGA TCCTCAAGAT
ATTGTAAATG ATATTTTAGA GGGAATCCAA GATAAAAGTA TTGTTCAAGT TGAGCTAAAT
AGAAGAAAAG CGATAGAGAA CGCTTTGAGT GAACAAAAAG AGAATGAAGT TGTTGTTATC
CTTGGCAAAG GCGATGAAAC TTATCAGATT ATATATGACC AAAAGTTTCC TTTCGATGAT
AGAGAAGTGG TAAGAGAGAT ACTCAAAAAT AAAATAATTT AA
|
|---|
| Protein sequence | MKIEIPDEAF RYITENSQEC DADTAFVLTP QNEKYLQNAK DNGAHSIINI KDVAKLFGIE
KIKIVGITGT NGKTTTASAI YSFLLDLGYR VAMQGTRGFF MNDRVIEEKT LTTPSLLNTY
KHIYQAVSEK CDFFIMEVSS HAIVQKRVEG LNFELKILTN ITQDHLDFHK TLGEYIAVKN
SFFQDDGRKL INKDETKSSF NFKNTFTYGI ENSATYRLIA YSLNNASSGI IQHFSEVVPF
TSSLHGFFNL YNLMAAIAAT HLLSGKKLEE VTAVVDNFAG VSGRMEQVSE SPNVIVDFAH
TPDGIQQVLN ALKEKELLVV FGAGGDRDRT KRPLMGRVAA SLAKKLYITS DNPRTEDPQD
IVNDILEGIQ DKSIVQVELN RRKAIENALS EQKENEVVVI LGKGDETYQI IYDQKFPFDD
REVVREILKN KII
|
|---|
| |