Gene Strop_4593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4593 
SymbolrpmH 
ID5061083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp5183122 
End bp5183259 
Gene Length138 bp 
Protein Length45 aa 
Translation table11 
GC content75% 
IMG OID640476860 
Product50S ribosomal protein L34 
Protein accessionYP_001161399 
Protein GI145597102 
COG category 
COG ID 
TIGRFAM ID[TIGR01030] ribosomal protein L34, bacterial type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000549229 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000848449 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAGCAAGC GCACCTTCCA GCCGAACAAC CGCCGGCGCG CGAAGACCCA CGGCTTCCGG 
CTGCGCATGC GCACCCGCGC CGGCCGCGCC ATCATCTCGA CCCGTCGCGC CAAGGGGCGC
GCTCGCCTGG CGGCCTGA
 
Protein sequence
MSKRTFQPNN RRRAKTHGFR LRMRTRAGRA IISTRRAKGR ARLAA