| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4590 |
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| Symbol | |
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| ID | 5061080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 5181278 |
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| End bp | 5182390 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640476857 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001161396 |
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| Protein GI | 145597099 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000213459 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000511998 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCTCGACC CTATCTACTA CACGATCTCG TGGATCCTGC TGCGCTGGCA CCAGGTATGG
GATGTCATCG GGGTGCCGGA AGGCGCGGTG CTCGGCACCA ACTGGGCCTG GATCCTCGCC
ATCATCTTCC TGGTGGTCAC CGTCCGGGTG ATCCTCTTCC CGGTCTTCGT CAAGCAGATC
AAGTCACAGC GGGCGATGCA GGCGCTGCAA CCGCAGGTCA AGGCGTTGCA GGAGAAGCAC
AAGGGTGACC GGGAGACGCT CCAGAAGGAG ATGATGGAGC TATACCGGAA GGAAAAGGCC
AACCCGCTCA TGGGCTGCCT TCCGATGTTC CTCCAGATTC CGGTCTTCCT CGGCCTGTTC
CACGTGCTCC GCCGGCTCAA CCCGAACAAG GACGAAAGCG GGAAGACGCT CTACGGCTGG
ACGGTCGACC AGTTCGACAG CGTATCGGTC GCGAAGCTGT TCACCGCGCC GATCGCCGGC
AAGTTCGGCT CCTCGCCCGA GGAACTGGCC GCGCTGGGTG CCGACGGCAC CACCGTCAAG
ATCATGGCTG GCATTCTGGT GCTGCTGATG ATGGGCACCA CCTATCTGAC CAGCCGTCAG
ATGATCCTCA AGACCGGCTG GGCCGAGGAC CCGCAGCAGC GGATGATCCA GCGGTTGATG
CTCTACGGCA TCCCGGCGTC GCTGCTCATC TCCGGCGCGA TCTTCCCGAT CGGTGTGATC
ATCTACTGGG TCACCAACAA CTTGTTCACG CTGGCCCAGC AGCAGTGGGT GTTGCGCAAG
TTCCCGCCGC CGCCGAGCGC GAAGTCCGGT ACGACTGGTA CGCGTGGTGC GGTGCAGCCG
GCAAAGAGCA GCGGTGGCCT CTTCGGCCGC GGCAAGTCCG CTCCCCCGAC TGCCACCCAG
CCGGCCGCGA CCAAGGTCGC TGCTCCGAAG CCGGGCGCCA AGCCCACCAG CCCGAAGAAG
GGCCAGCCCG CCGCCGGCCA GAAGGGTCAG CCGGCGAACC AGCCGGCCGG CCCGAAGAAG
GGGCAGCCCG ACGGCCAGAA GGGTCAGCCG GCCGGCCAGA AGAAGGGTCA GCCCGCGAAC
CAGAAGGGTC GCCCCGCCAA ACGGCAGGGG TGA
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| Protein sequence | MLDPIYYTIS WILLRWHQVW DVIGVPEGAV LGTNWAWILA IIFLVVTVRV ILFPVFVKQI
KSQRAMQALQ PQVKALQEKH KGDRETLQKE MMELYRKEKA NPLMGCLPMF LQIPVFLGLF
HVLRRLNPNK DESGKTLYGW TVDQFDSVSV AKLFTAPIAG KFGSSPEELA ALGADGTTVK
IMAGILVLLM MGTTYLTSRQ MILKTGWAED PQQRMIQRLM LYGIPASLLI SGAIFPIGVI
IYWVTNNLFT LAQQQWVLRK FPPPPSAKSG TTGTRGAVQP AKSSGGLFGR GKSAPPTATQ
PAATKVAAPK PGAKPTSPKK GQPAAGQKGQ PANQPAGPKK GQPDGQKGQP AGQKKGQPAN
QKGRPAKRQG
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