| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4574 |
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| Symbol | |
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| ID | 5061064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 5162096 |
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| End bp | 5163553 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640476841 |
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| Product | HDIG domain-containing protein |
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| Protein accession | YP_001161380 |
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| Protein GI | 145597083 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR02692] tRNA adenylyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.119435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGACT CCGCACCGCA CACCGCTGAC CGCCGCGAAC TTACCGCCGC GCAGCGCACC
GCCGTGGCCG AACTGCTCCG GGTCTCCCCG GTCGCCGACG AGTTGGGCCG CCGCTTCGCG
AGCGCCGGCC ACGAACTGCA CCTGGTCGGC GGATCGGTCC GCGACGCACT GCTCGGCCGG
CTCGGCGACG ACTTGGACTT CTGCACCGAC GCGCACCCGG ACCAGACGCT GCGGATCGTG
CGTGGTTGGG CCGAGGCGAT CTGGGAGACC GGCCGGGAGT TCGGCACCAT CGGGGTGCAG
CGCGACGGTC TGCGGCTGGA GATCACGACC TTCCGGGCGG AGGTGTACGA CCAGGTCAGC
CGCAACCCAG TGGTGCAGTA CGGCACGAGC CTGGCCGAGG ACCTGAAACG GCGGGACTTC
ACCGTCAACG CGATGGCGGT CAGCCTGCCC GAGCATCGCT TCATTGACCC ACACGGCGGG
TTGGCGGACC TCGCGGCCAA GGTGGTCCGT ACCCCGGCGG CACCGGAGGA GTCGTTCCGC
GACGACCCGC TGCGGATGCT GCGGGCGGCC CGGTTCGCCG CGCAGCTGCG GTTCGCCGTG
CACCCGGACG TACGGGCGGC GATGGTGCGG ATGGCCGCCG ACCTGGACCG GATCACGGCG
GAGCGGATCC GGGACGAGTT CACCAAGCTG CTCTGCGGCG CCGATCCGAT CGCCGGCCTG
CGGCTGCTGG CGGACACCGG GCTGGCCGAG CGGTTCCTGC CCGAGTTGAC CGGGCTCAAG
CTGGAGATCG ACGAGCACGC CCAACACAAG GACGTGTACG AGCACACGCT GACCGTGGTG
CGCAACGCCG TCACGTACGA GGAGGACGGC TGCGACTTCA TCCTCCGGAT GGCCGCGCTC
ATGCACGACG TCGGCAAGCC GGCGACGAAG GCGGTCGGCC CGGACGGCCG GGTCAGCTTC
CACCACCACG AGGTCGTCGG CGCCCGGATG ACGAAGGCCC GGATGAAGGC GCTGCGCTTC
CCCAAGGAGA CCACCACCAA GGTCACCGCC CTGGTCGCGC TGCACCTGCG CTTCTACGGG
TACGGCCGGG GCGAGTGGAC CGACTCGGCG GTGCGCCGGT ACGTCACCGA CGCCGGTGAC
GTCCTGGCGC GGCTGCACAA GCTGACCCGC TCCGACTGCA CCACCCGCAA CCGGCGCAAG
GCCGCCCAGC TCGCCGCCGA CTACGACGCG CTGGAGGAGC GGATCGCCCG GCTCGCGGCG
GAGGAGGACC TGGCCCGGGT CCGCCCCGAC CTGGACGGCA ACGCGATCAT GGAGCTACTC
GGCGTACCGC CGGGTCCGGT TGTCGGGCAG GCCTGGAAAC ACCTCAAGGA GGTACGGCTG
GAGCGGGGCC CGCTGGGTCG GGACGAGGCC GAGGCCGAGC TGCTGCGCTG GTCCCGCGAG
CAGGGAATCG TCGAGTAG
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| Protein sequence | MSDSAPHTAD RRELTAAQRT AVAELLRVSP VADELGRRFA SAGHELHLVG GSVRDALLGR
LGDDLDFCTD AHPDQTLRIV RGWAEAIWET GREFGTIGVQ RDGLRLEITT FRAEVYDQVS
RNPVVQYGTS LAEDLKRRDF TVNAMAVSLP EHRFIDPHGG LADLAAKVVR TPAAPEESFR
DDPLRMLRAA RFAAQLRFAV HPDVRAAMVR MAADLDRITA ERIRDEFTKL LCGADPIAGL
RLLADTGLAE RFLPELTGLK LEIDEHAQHK DVYEHTLTVV RNAVTYEEDG CDFILRMAAL
MHDVGKPATK AVGPDGRVSF HHHEVVGARM TKARMKALRF PKETTTKVTA LVALHLRFYG
YGRGEWTDSA VRRYVTDAGD VLARLHKLTR SDCTTRNRRK AAQLAADYDA LEERIARLAA
EEDLARVRPD LDGNAIMELL GVPPGPVVGQ AWKHLKEVRL ERGPLGRDEA EAELLRWSRE
QGIVE
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