| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4572 |
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| Symbol | |
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| ID | 5061062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5160350 |
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| End bp | 5160865 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640476839 |
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| Product | sigma-70, region 4 type 2 |
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| Protein accession | YP_001161378 |
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| Protein GI | 145597081 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.155315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGAAC GCATCGACGG GGAGTTCACC GCGTTCGTCA ACGAACGGGG TGGTGTTCTA
CTGCGGGCCG CCTACGCCCT GGCCGGCAGC CAGCACGGCG CCGAGGACCT GCTCCAGACC
GCGCTGGCCA AGGCGTACGC CCGCTGGCCA CGGATCCGGG GGGACGCCGA GCCGTACGTA
CGCCAGATCC TCTACCGGGA CCAGGTGTCC GGCTGGCGAC GGCGGGTCCG TCGGCCGGAG
TTCCCGGTCG CCGTGCCACC CGACAAGGTC GGCGGACCCG ACCGCGGGCA CGAGGTTGAC
CTGCGGCTGC TACTGCGCGA GGCGCTGCTG GCGCTGCCAC CACGGCAACG CGCGGTACTG
ACCCTGCGCT ACCTGGAAGA CCTGAGTGTC GAGCAGACCG CCGAGTTGCT CGGCTGCCGG
GCCGGCACGG TCGCCAGTCA GGCATCCCGG GCATTGGCCC GGCTGCGGCA ACTGGTTCCC
GCACTCGACG GACACCTCAC CGAGGAGCGG AGATGA
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| Protein sequence | MSERIDGEFT AFVNERGGVL LRAAYALAGS QHGAEDLLQT ALAKAYARWP RIRGDAEPYV
RQILYRDQVS GWRRRVRRPE FPVAVPPDKV GGPDRGHEVD LRLLLREALL ALPPRQRAVL
TLRYLEDLSV EQTAELLGCR AGTVASQASR ALARLRQLVP ALDGHLTEER R
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