| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4502 |
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| Symbol | |
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| ID | 5060992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 5092764 |
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| End bp | 5093336 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476769 |
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| Product | sigma-70, region 4 type 2 |
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| Protein accession | YP_001161308 |
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| Protein GI | 145597011 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.196847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.34092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGGTCA GGATGCACGA TCCCGGTGAC ACCCGGGAGG AACGGTCGCC CACGCCCACG
GCCACGGCGG GTGCGGATGC GGGTACGGGC GACAGCTTCG AGGAGTTCTA CGCCGCTACG
TTCCAACCGT TGCTGCTGCA GCTGTACGCC TACACCGCCG ACATCGACCA AGCCCGCGAC
GCGGTCCAGG AGGCATTCAG CCGGGCCTGG CCCCGCTGGA ACAAACTGGT CCACTACGAC
CGCCCAACAG CCTGGATCCG CACTGTCGCG ATGAACGTCG CACGCAACCG CTGGCGCCGG
CTACGCGCCG CCCGCGCCCA CGCCCGGTTC CGCCGCGACG ACGTCATCGA AGGACCGAGC
CCCGACCGGG TAGCGCTGGC CCGCGCACTC GCCACGCTGC CCGAAAAGCA GCGCCGGGTG
ATCGTGCTCT TCCACGTGGC CGATCTCAGC ATCACCGAGA TCGCCGAGCA GGAAGGAGCC
GCCACCGGCA CTGTGAAGTC CTGGCTACAC CGGGGCCGCA CCGCACTCGC CGTCGCACTC
TCCGACTCGG GGACGGAGGA GACCAATGCC TGA
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| Protein sequence | MMVRMHDPGD TREERSPTPT ATAGADAGTG DSFEEFYAAT FQPLLLQLYA YTADIDQARD
AVQEAFSRAW PRWNKLVHYD RPTAWIRTVA MNVARNRWRR LRAARAHARF RRDDVIEGPS
PDRVALARAL ATLPEKQRRV IVLFHVADLS ITEIAEQEGA ATGTVKSWLH RGRTALAVAL
SDSGTEETNA
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