Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4474 |
Symbol | |
ID | 5060964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 5065697 |
End bp | 5066404 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640476741 |
Product | glycosyl transferase family protein |
Protein accession | YP_001161280 |
Protein GI | 145596983 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0455914 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCTCT CGATCCTCAT GCCGGTCTAC AACGAGGAAG AACGCATCGC GGACGCCTTG AAGCAGGCGC TCGCGGTGGA CTATCCGTGC GAGATCGAGC TCGTCGTGGT CGACGACGGG AGTCGGGACG GCACCGGCGA GATCCTTGAC CGGGCCGATG ACGCCCGGGT CCGCGTGATC ACCCACCCGC GCAACTCCGG CAAGGGTGCG GCGATCCGGA CGGCGGTCGA CCACGCCGAG GGTGAGTACA TGGTGATCCT CGACGCCGAC CTGGAGTACG ACCCGCAGGA CATCGCCAAG CTGCTCGCGC CGGTCCTCGA TGGGCGGGCC ACGGTCGTCT ACGGTAATCG CACCTTCGGC AGCCACAGCG CCTACAGCTT CTGGTACGTG ATGGGCAACA AGGGCGTCAC GATGGTGGCC AACGTGCTGT TCAACTCCTA CATCGGCGAT CTGGAGACCT GCTTCAAGCT GATGCCGATC GAGTTGTACC GCTCGCTGGA GATTCACTCT CGCGGCTTCG GCATGGAGGC GGAGGTGACC GGCAAGCTGC TGCGCCGTCG GATCCGCCCG TACGAGGTGC CGATCAGCTA CCGGGCCCGC GGCCGCGAGG AGGGCAAGAA GATCACCTGG AAGGACGGGG TTGAGGCGGT CTGGATTCTC AGCCGGGAGC GGGCCCGGCG CCGTCCTCCG GGTACCGCCC CCCGCTGA
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Protein sequence | MKLSILMPVY NEEERIADAL KQALAVDYPC EIELVVVDDG SRDGTGEILD RADDARVRVI THPRNSGKGA AIRTAVDHAE GEYMVILDAD LEYDPQDIAK LLAPVLDGRA TVVYGNRTFG SHSAYSFWYV MGNKGVTMVA NVLFNSYIGD LETCFKLMPI ELYRSLEIHS RGFGMEAEVT GKLLRRRIRP YEVPISYRAR GREEGKKITW KDGVEAVWIL SRERARRRPP GTAPR
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