| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4411 |
|---|
| Symbol | |
|---|
| ID | 5060897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4992512 |
|---|
| End bp | 4993012 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640476674 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001161217 |
|---|
| Protein GI | 145596920 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.959952 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGACA CCGACGACAC CAGGACCGCC CGCCACGCCC TCGGCCGTCG CCTCGCCGAG
CTGCGCCGCG CCGCCGGGCA GACCCAGCAC GGTCTCGCTC GGCTCGTCCA GTACGGACGC
AGCTCCGTGG CGAACACCGA GACCGGCCGC CAGCACCCGG AACGGCCCTT CTGGACCCGC
TGCGACGAGG CGCTGCGCAC CGGTGGAGTG CTCACCGCCG AATACGACCG CATCGCGAAC
CGGGACCACC GCCACCGTGC GGTCCAGTCG CGCGGCCGTG CCGGCCCGCC CAGCGACCCC
CCACCCAGGT GGTGGGAGGC CGTGGACGAC ACCGAAGGCT ACTCACCGGC CGCCCTCGTG
GCCCGGCTGT GTCTCCTGCG CCACGATGTG GACCGCGCGA TCGTCGCGCT GACCTGGCTT
GGCTACCACC CCACCGCGAC GATCAACCAC TCCGGGTCGC CCGCGGAGAC AAACGAGGAC
TGGTCCGCGA CATCGTCGTA G
|
|---|
| Protein sequence | MRDTDDTRTA RHALGRRLAE LRRAAGQTQH GLARLVQYGR SSVANTETGR QHPERPFWTR
CDEALRTGGV LTAEYDRIAN RDHRHRAVQS RGRAGPPSDP PPRWWEAVDD TEGYSPAALV
ARLCLLRHDV DRAIVALTWL GYHPTATINH SGSPAETNED WSATSS
|
|---|
| |