Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4388 |
Symbol | |
ID | 5060874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4964049 |
End bp | 4966778 |
Gene Length | 2730 bp |
Protein Length | 909 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640476651 |
Product | ribonucleoside-diphosphate reductase, alpha subunit |
Protein accession | YP_001161194 |
Protein GI | 145596897 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.370714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.249939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGAGTCC GGGACTGCCC CGCAGCGGTG AGTGGGAACG ACCGCCGTCA TCACGCACTG GGCTCATCGA GGCCTGGGAA GCGACGGCCA GTAGGCGACC GGGTCTCCCG GGCGTGCCCG CGAGTCCGAA GACCTGCCAG CGCGCCGCAC GCGTCGTGTG CGGCGGTCGG AGGCCGCGCG GGAGGGCCGA CGCCGTCAGC CGTCCGGTGT GATCGCTCCG CCGGGCGCCG ATTGTGGCGT CCCCCGTGCG TTCGTCGACC TCGTCGACAG GCGGAGGAGG GGGAGATGAC GGTGACGCGG GAACGCGCCA CGAACGGTCC GGCCGGAGCG GAGCAGCGGC GGCAGGTGAT GGGGGTCCGC AAGCGCAACG GCGACACCGA GCCGGTGGAC GTCAACAAGA TCGTCCGGGC GGTGGAGCGG TGGGTCGCCG ACCTGGACGA GGTGGACCCG CTGCGGGTGG CGACCAAGAC AATCAGCGGC CTGTACGACG GGGCGACGAC GGCCGAGCTG GACCGATTGT CGATCCAGAC GGCGGCGGAG CTGATCGGCG AGGAGCCGCA GTACTCGAAA CTCGCGGCGC GGCTGTTGGC CGCGTACGTG GACAAGGAGG TCCGTGGCCA GCAGGTGGCC AGTTTCAGCC AGTCCATCCG GTACGCCCAC GGCCTTGGCC TGATCAGCGA CGAGACCGCT GCCTTCGTGT CCCGCAACGC CCGCAAGCTG GACGACGCGG TGGACCCCGC CGGCGACCTG CGGTTTGAGT ACTTCGGGCT GCGTACGGTC GCGGACCGTT ACCTCCTGCG GCACCCGCAG TCGCGACTGG TGGTGGAGAC CCCGCAGTAC TGGCTGCTGC GGGTGGCCTG TGGACTGTCA GGGACCCCGG CCGAGGCGAT CGGGTTCTAC CGGTTGATGT CGTCGCTGGC ATACCTACCC AGCTCGCCGA CGCTGTTCAA CTCCGGCACC CGGCACACCC AGATGTCGTC GTGCTTCCTG GTCGACTCGC CCCGCGACGA GCTGGACTCC ATCTACCAGC GGTACCACCA GGTCGCGAAG CTGTCGAAGT TCTCCGGCGG CATCGGCATC GCCTGGTCGC GGGTACGCGG CCGGGGCGCG CTGATCCGGG GGACGAACGG CCGGTCGAAC GGCATCGTGC CGTTCCTCAA GACCCTCGAC GCCGGGGTCG CCGCGGTCAA CCAGGGAGGC CGGCGCAAGG GCGCGGCCTG CGTCTACCTG GAGCCCTGGC ACCCCGACAT CGAGGAGTTC CTGGAGCTGC GGGACAACAC CGGCGAGGAC GCCCGGCGTA CGCACAACCT GAACCTGGCC AACTGGCTCC CGGACGAGTT CATGCGGCGG GTCGAGGCGG ACGGCGACTG GTCGCTGATC GACCCGTCCG AGGCCCCGGA GCTGCCCGAC CTGTACGGCG AGGAGTTCGA CGCCGCCTAC CGGGTCGCGG AGAAGAAGGC GGTCCGTACG GTCAAGGCCC GGGACCTGTA CGGGCGGATG ATGCGCACCC TGGCGCAGAC CGGCAACGGG TGGATGACCT TCAAGGACCG CTCGAACACG CTGTCCAACC AGACCGGGGA GCCCGGCAAC ACGATTCACC TGTCGAATCT CTGCACCGAG ATTCTCGAGG TCAACAATGA CGCTGAGACC GCGGTGTGCA ACCTGGGCTC GGTCAACCTG GGCGCCCACG TCACCGCCGA CGGGGTGGAC TGGGAGAAGC TGCGGGACAC CGTCCGCACC GCGGTGGTGT TCCTCGACCG CGTGATCGAC ATCAACTACT ACCCGGCCGA GCAGGCGGCG GCCTCGAACC CGCGCTGGCG GCCGGTCGGG CTCGGGCTGA TGGGCCTGCA GGACGCGTTC TTCACGCTCC GGCTGCCGTT CGACTCGGCC GAGGCGAGCG AGCTCTCCAC CCGGGTGCAG GAGGAGATCT TCCTGACCGC GTTGGAGACC TCCGCCGGGC TCGCCGAGCG GTTCGGCCCG CATCCCGCGT ACGCGCAGAC CCGCGCGGCC CGGGGCGACC TGCACCCGGA GCTGTGGGGT GCCGTGCCGA GCCAGCCGCA ACGGTGGGCC GGGCTGAAGG CACGGGTCGG GGAGCACGGT CTGCGTAACT CGCTGCTGGT GGCGATCGCG CCGACGGCGA CGATCGCCTC GATCGCCGGC TGCTACGAGT GCATCGAGCC GCAGGTGTCC AACCTGTTCA AGCGCGAGAC CATGTCCGGT GAGTTCCTTC AGGTCAACAC GTACCTGGTC GGCGAGCTGA AGGCACGCGG GCTGTGGACG GCATCGATCC GGGACCAGAT CAAGCGCGCG GAGGGGTCGG TACAGGGCCT CGCCGAGCTG CCCGCCGAGG TGCGGGAGCT GTTTCGTACG GCGTGGGAGC TTCCGCAGCG GGCACTGATC GACCTGGCCG CGGCCCGCGC CCCGTACATC GACCAGTCTC AGTCGTTGAA CCTGTTCCTG GCCGCGCCGA CGATCGGCAA GCTCTCCTCG ATGTACCTGT ACGCCTGGAA GTCCGGGCTG AAGACCACCT ACTACCTGCG GTCCCGTCCC GCGACGCGGA TCCAGCAGGC GACAGTCGCC GTCACGTCGA CCGCCCAGCC GGGTGTCGCC GTCGCGTCGT CGGCCCAGCC GGGTGGTGCC GCGTCGTCGA TCTCCGGTTT CGCCGGGACC GACGCCGAGG CGCTGGCCTG CTCCCTGGAA AACCCCGAAA GCTGCGAGGC ATGTCAATGA
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Protein sequence | MGVRDCPAAV SGNDRRHHAL GSSRPGKRRP VGDRVSRACP RVRRPASAPH ASCAAVGGRA GGPTPSAVRC DRSAGRRLWR PPCVRRPRRQ AEEGEMTVTR ERATNGPAGA EQRRQVMGVR KRNGDTEPVD VNKIVRAVER WVADLDEVDP LRVATKTISG LYDGATTAEL DRLSIQTAAE LIGEEPQYSK LAARLLAAYV DKEVRGQQVA SFSQSIRYAH GLGLISDETA AFVSRNARKL DDAVDPAGDL RFEYFGLRTV ADRYLLRHPQ SRLVVETPQY WLLRVACGLS GTPAEAIGFY RLMSSLAYLP SSPTLFNSGT RHTQMSSCFL VDSPRDELDS IYQRYHQVAK LSKFSGGIGI AWSRVRGRGA LIRGTNGRSN GIVPFLKTLD AGVAAVNQGG RRKGAACVYL EPWHPDIEEF LELRDNTGED ARRTHNLNLA NWLPDEFMRR VEADGDWSLI DPSEAPELPD LYGEEFDAAY RVAEKKAVRT VKARDLYGRM MRTLAQTGNG WMTFKDRSNT LSNQTGEPGN TIHLSNLCTE ILEVNNDAET AVCNLGSVNL GAHVTADGVD WEKLRDTVRT AVVFLDRVID INYYPAEQAA ASNPRWRPVG LGLMGLQDAF FTLRLPFDSA EASELSTRVQ EEIFLTALET SAGLAERFGP HPAYAQTRAA RGDLHPELWG AVPSQPQRWA GLKARVGEHG LRNSLLVAIA PTATIASIAG CYECIEPQVS NLFKRETMSG EFLQVNTYLV GELKARGLWT ASIRDQIKRA EGSVQGLAEL PAEVRELFRT AWELPQRALI DLAAARAPYI DQSQSLNLFL AAPTIGKLSS MYLYAWKSGL KTTYYLRSRP ATRIQQATVA VTSTAQPGVA VASSAQPGGA ASSISGFAGT DAEALACSLE NPESCEACQ
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