| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4375 |
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| Symbol | |
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| ID | 5060861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4952656 |
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| End bp | 4954143 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640476638 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001161181 |
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| Protein GI | 145596884 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCT CCGACATAAT GCCATCGACC AGAAGCCCGG CGACCATCAC TGTTGTCGGG
TTGGCGATGC TCAACATCGT CGCGGTCGTC AGCCTGGACG GGCCGCCGAC CGAGGCCGAG
TACGGACTCA GCGCGGCCTT CTATTACCTG TTTGCGGCGG TCTTCTTCCT CGTTCCGGTT
TCGCTTGTCG CAGCCGAGCT CACCACCGCG TGGCCCGAGA GGGGCGGCGT GTTCAGGTGG
GCCGGAGAGG CATTCGGGGC CCGCTGGGGT TTCCTGGCGA TCTTTCTGCT GATCGCCCAG
GTGACGATCT GGTTTCCACT GGTCCTCACC TTCGCCGCGA TCTCCCTGGC CTACACCGGC
CCCGAGGCGA CAGTCGACCA GAAGCTCTCC GGTAACCAGC TCTACGTTCT GGTCTCCGTG
CTTGCCGTCT ACTGGCTCGC CACCGCCATC GCCGCCCGTG GGGTAGCCGC CTTCACCCGG
GTCGCGAAGT GGGGTGGAAT TGTCGGGACG ATCATCCCCG CCGCCGCCCT CGTCACCCTC
GGCATCGCCT ACCTGCTCAC CGGGGGCGAG TCGCAGATCC CATTACGCTG GGATGACGCG
ATTCCCGACT TGAGCAACGT GAGCAATCTG GCGCTCGCGG CGAGCATCTT TCTTTTTTAT
TCTGGCATGG AAATGAACGC GGTCCACGTC CAAGATGTAA GGAATCCGGA TCGGGGGTAT
CCGGTTGCGA TACTTTTCGC AGCGTTGGGA ACAGCGACCA TCCTCATTTT GGGGACACTC
ACGATCGCCT TCGTCGTGCC CAGGGAAGAA ACTGGCGGCA CCCAGTCCCT ACTCATCACT
TTTATCAACG CGTTTCACTG GTTCGGCCTG TCCTGGGCTA CGCCGATCCT GGCGTTCGCG
CTCGCGATTG GTGTCCTGGC CGGCATTGTG ACCTGGGTGG CCGGACCTTC CAGCGCCATG
CACTCGGTGG CGAAGGCAGG CTACCTGCCC ACCTTCTTTC ATGCCGCCAA CAAGAACAGG
ATGCCCATCC GAATCATGCT GGTCCAGGCA GTCGCGGTCA GCGCCGTAGC AGTCGTGTTT
GTCTTCATGC CGTCGGTGCA GGCGGCCTTC CAGATCCTCA GCCAGTTGGC CGGACTCCTG
TATCTGGTGG TCTACCTGAC CATGTTCGCC TCGGCGATCT ACCTCCGCTA CCGCCAACCT
GACCGACCAC GGCCATACCG AGTGCCGGGC GGACTCGCGG GAATGTGGAT CATCGGCGGA
GCCGGCTTTG TCGCCTCGGC ACTCGCCCTC GCCTCGAGCC TCGTGCCACC GAGCCAGATC
GGCATTGGCA GCCCCGCTCG CTACCTCGGC CTACTGGTCG GGCTGGCCGC TTTGATCATC
ACAGCCCCAC TTCTGCTGTT CGCGAGGCGC AAGCCGCACT GGCGCGACCC GGCCAGCAAT
GTCGAACCGT TCGCCTGGGA GACCCCCGAT GACCGCCCCG GCCCCTGA
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| Protein sequence | MASSDIMPST RSPATITVVG LAMLNIVAVV SLDGPPTEAE YGLSAAFYYL FAAVFFLVPV
SLVAAELTTA WPERGGVFRW AGEAFGARWG FLAIFLLIAQ VTIWFPLVLT FAAISLAYTG
PEATVDQKLS GNQLYVLVSV LAVYWLATAI AARGVAAFTR VAKWGGIVGT IIPAAALVTL
GIAYLLTGGE SQIPLRWDDA IPDLSNVSNL ALAASIFLFY SGMEMNAVHV QDVRNPDRGY
PVAILFAALG TATILILGTL TIAFVVPREE TGGTQSLLIT FINAFHWFGL SWATPILAFA
LAIGVLAGIV TWVAGPSSAM HSVAKAGYLP TFFHAANKNR MPIRIMLVQA VAVSAVAVVF
VFMPSVQAAF QILSQLAGLL YLVVYLTMFA SAIYLRYRQP DRPRPYRVPG GLAGMWIIGG
AGFVASALAL ASSLVPPSQI GIGSPARYLG LLVGLAALII TAPLLLFARR KPHWRDPASN
VEPFAWETPD DRPGP
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