Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4275 |
Symbol | |
ID | 5060760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4842348 |
End bp | 4844882 |
Gene Length | 2535 bp |
Protein Length | 844 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640476537 |
Product | ATPase |
Protein accession | YP_001161081 |
Protein GI | 145596784 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.219573 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAGC GGTTCACCGA CCGAGCGCGT CGGGTTGTCG TCCTGGCCCA GGAAGAGGCC CGGATGCTCA ACCACAATTA CATTGGTACT GAGCACATTC TGCTGGGCCT GATCCACGAG GGTGAGGGCG TGGCCGCCAA GGCGCTGGAG AGTCTGGGGA TCTCTCTGGA GGGCGTGCGA CAGCAGGTTG AGGAGATCAT CGGGCAGGGC CAGCAGGCGC CGAGTGGTCA CATTCCGTTC ACCCCGCGGG CCAAGAAGGT GCTGGAGCTG TCACTGCGGG AGGCGCTGCA GCTTGGGCAC AACTACATCG GTACCGAGCA CATTCTGCTG GGCCTGATCC GTGAGGGTGA GGGCGTGGCG GCTCAGGTGC TGGTGAAGTT GGGGGCGGAC CTCAATCGGG TCCGTCAGCA GGTGATCCAG CTGCTGTCGG GCTATCAGGG CAAAGAGCCG GCGGCGGCGG GGACAGCGCC AGGCGAGGCC GCTCCGTCGA CGAGCTTGGT GTTGGACCAG TTCGGTCGCA ATCTCACGCA GGCGGCTCGT GAGGGCAAGC TTGATCCGGT TATCGGTCGG GAAAAAGAGA TCGAGCGGGT CATGCAGGTG CTGTCCCGGC GGACGAAGAA CAACCCGGTG CTGATCGGTG AGCCGGGTGT GGGCAAGACC GCCGTGGTGG AGGGCCTGTC GCAGCGGATC GTCAAGGGCG AGGTGCCCGA GACGCTGAAG GACAAGCAGC TGTACACCCT TGACCTGGGT GCTTTGGTAG CGGGTTCACG GTATCGGGGT GACTTCGAGG AGCGGTTGAA GAAGGTCCTC AAGGAGATCC GTACCCGTGG TGACATCATC CTGTTCATTG ATGAGATCCA CACGTTGGTG GGCGCGGGTG CCGCCGAGGG TGCGATCGAC GCGGCGAGCA TTCTGAAGCC GATGCTGGCG CGGGGTGAGT TGCAGACCAT CGGCGCGACG ACGCTGGATG AGTACCGCAA GCACCTGGAG AAGGACGCCG CGTTGGAACG CCGGTTCCAG CCCATCCAGG TGGGTGAGCC GTCGTTGCCG CACACCATTG AGATCCTGAA GGGTCTGCGG GACCGCTACG AGGCGCACCA CCGTGTGTCG ATCACGGATG CGGCCCTGGT GGCGGCGGCA ACCCTCGCTG ACCGCTACAT CTCGGATCGA TTCCTGCCGG ACAAGGCCAT CGACTTGATC GATGAGGCGG GCGCGCGGAT GCGGATCCGG CGGATGACCG CGCCGCCAGA CCTGCGGGAC TTCGATGAGC GGATCGCGCA GGTGCGTCGG GACAAGGAGT CCGCGATCGA CGCGCAGGAC TTCGAACGAG CCGCGCAGCT GCGGGACACC GAGAAGCAGC TGCTGGGCCA GAAGGCGCAG CGGGAGAAGG AGTGGAAGGC CGGTGATCTG GATGTCGTCA CCGAGGTCGA CGACGAGCAG ATCGCCGAGG TGCTCGGTAA CTGGACGGGC ATCCCGGTCT ACAAGCTGAC CGAGGAGGAG ACCTCCCGGC TGCTGCGGAT GGAAGACGAG CTGCACAAGC GGGTCATTGG CCAGGAAGAC GCGGTCAAGG CGGTGTCGAA GGCGATCCGC CGCACGCGGG CCGGCCTGAA GGACCCGAAG CGGCCGTCTG GGTCGTTCAT CTTCGCGGGT CCGTCCGGGG TCGGTAAGAC CGAGTTGTCC AAGGCCCTCG CGGAGTTCCT CTTCGGCAGC GAAGACGCGT TGATCCAGCT GGACATGTCC GAGTTCCACG ACCGGTACAC GGTGTCCCGG CTCGTCGGTG CGCCTCCCGG CTACGTCGGC TACGACGAGG GCGGGCAGCT GACCGAGAAG GTCCGCCGGC GGCCGTTCAG CGTGGTCCTC TTCGACGAAA TCGAGAAGGC CCACCCGGAC GTGTTCAACA CGCTGCTGCA GATCCTCGAG GACGGGCGGC TCACCGACGG TCAGGGCCGG ATCGTGGACT TCAAGAACAC GGTCATCATC CTGACAACCA ACCTCGGTAC CCGCGACGTC GCCAAGGCGG TCTCGCTGGG CTTCCAGGCC TCTGATGACT CCGACTCGAA CTACGACCGG ATGAAGCAGA AGGTCAACGA CGAGCTCAAG CAGCACTTCC GGCCGGAGTT CCTCAACCGG ATCGACGACA CCATCGTCTT CCACCAGCTG CGCCACCGGG AGATCCTCTC GATCGTCGAT ATCATGATCG GTCGGATCGA GACCCAGCTG CGCAACAAGG ACATGGGCCT GGAGCTCACC GACAACGCCA AGCAGTACCT CGCGACGAAG GGCTTCGACC CCGTCCTCGG TGCCCGGCCG CTACGCCGCA CGATCCAGCG GGACATCGAG GACAACCTCT CCGAGCGGAT CCTGTTCAAC GAGCTCAACC CCGGCCAGAT CGTCATCGTC GACTGCGACG GTGATCCGAC CAATATCGAT TCGTCCACCC TCACCTTCCG CGGCACCGAC AAACCGGCAG ACCTGCCGGA CGCGGTCCCA GCCGACCTCG GCGGCGCTGC CACGGGGGCG GACGACACGG CGTAG
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Protein sequence | MFERFTDRAR RVVVLAQEEA RMLNHNYIGT EHILLGLIHE GEGVAAKALE SLGISLEGVR QQVEEIIGQG QQAPSGHIPF TPRAKKVLEL SLREALQLGH NYIGTEHILL GLIREGEGVA AQVLVKLGAD LNRVRQQVIQ LLSGYQGKEP AAAGTAPGEA APSTSLVLDQ FGRNLTQAAR EGKLDPVIGR EKEIERVMQV LSRRTKNNPV LIGEPGVGKT AVVEGLSQRI VKGEVPETLK DKQLYTLDLG ALVAGSRYRG DFEERLKKVL KEIRTRGDII LFIDEIHTLV GAGAAEGAID AASILKPMLA RGELQTIGAT TLDEYRKHLE KDAALERRFQ PIQVGEPSLP HTIEILKGLR DRYEAHHRVS ITDAALVAAA TLADRYISDR FLPDKAIDLI DEAGARMRIR RMTAPPDLRD FDERIAQVRR DKESAIDAQD FERAAQLRDT EKQLLGQKAQ REKEWKAGDL DVVTEVDDEQ IAEVLGNWTG IPVYKLTEEE TSRLLRMEDE LHKRVIGQED AVKAVSKAIR RTRAGLKDPK RPSGSFIFAG PSGVGKTELS KALAEFLFGS EDALIQLDMS EFHDRYTVSR LVGAPPGYVG YDEGGQLTEK VRRRPFSVVL FDEIEKAHPD VFNTLLQILE DGRLTDGQGR IVDFKNTVII LTTNLGTRDV AKAVSLGFQA SDDSDSNYDR MKQKVNDELK QHFRPEFLNR IDDTIVFHQL RHREILSIVD IMIGRIETQL RNKDMGLELT DNAKQYLATK GFDPVLGARP LRRTIQRDIE DNLSERILFN ELNPGQIVIV DCDGDPTNID SSTLTFRGTD KPADLPDAVP ADLGGAATGA DDTA
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