Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4242 |
Symbol | |
ID | 5060727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4805754 |
End bp | 4807088 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640476504 |
Product | Allergen V5/Tpx-1 family protein |
Protein accession | YP_001161048 |
Protein GI | 145596751 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.152087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCGG ATGATAATCG CCGGCGACCC GAACCGGCGG CCGACGGCTG GGACCGGCCT GCCGACGAAT GGGACCGGCG GCAACAGACC GCGCACCGGC GGGCGGAGTC CGAGACCCCA CAAGGCTGGG CAGCCGCGGG TAGCTCGTAC CATGACCAAC CCTCGCGGGG TGGGCAAGCC GCCCCCACCT GGCAGCACAC CGACGGCTGG CAGCAGGAAT CAGCGGGCGG CTGGCGCCGG CAGCCCACGG GCTGGCGAGA CGAGCCCTCC GGAGGCGGGC GTCACGCGGC TGGTGCCACC GGAGGACCCG AGGTCACCGG CGGTTGGCGG CCTGAGGAGA CGGCCACCAG GCCGACCGCT GGGTACGAAG ACGACATGAC CAGCATGCGG CCGGTCGCTG GCGCCGCTCC GGCCGACGCT ACATCCGCCA ACAAGGGCCC TCGGGTCGGC CACCGGAACC GCCGGCCCGT GCTCATCGGG GCCGCGGCGG CGGCCACGCT GGTCGTGAGC CTCGGAGCCG GCGCCGCCGC ACTGTCCGAC GGTGGCGACA CCGTCCCCAC CTCGGCACTC AAGGACATTG TGGCCACGAA TCCGACCTCG TATGAGGGGG GCGTGACGTC GTCCTCGAGC AGTCCCAGCA CCGCGTGGAG CAACGCCTCA CAGTCGCGCT CGGAAAACGC GCGCCGGAAG TCAGCCGCAT CGTCGCGTCA TTCCACCAGG TCCCGCTTCG ACCAGGAACG CCACAGGGGC AGCTACCGCT CCAAGCCGTC ACATACCACC ACCGCGCCCA GCCCGACTCG GGTGCCCACC ACCGCGCCCA GCCCCACTCG GGTGCCCACC ACCGCGCCCA GCCCGACTCA GGTACCCACC ACCGCGCCCA GCCCGACTCA GGTACCCACC ACCGCGCCCA GCCCCACTCA GGTACCCACC ACCGCACCCT CCGACGGCGG GGTGAGCACC GAGGCCAGCG AGGTGGTCCG GCTGGTCAAC GCCGAGCGTG CGAAGGCTGG CTGCGCGGCA CTGAGTATCG ACGAGAAGCT GATGACCGCC GCCCAGCGGC ACAGCCAGGA CCAGGCCGAC CAGCAGAAGA TGTCGCACAC GGGCAGCAAC GGCAGTAGCC CCGGCGACCG GATCACCGCT GTCGGCTACC AGTGGCGCAC CTACGGGGAA AACGTCGCCT GGAACCAGCA GTCCCCCGAA GCCGTGATGA CCGCGTGGAT GAACAGCCCC GGCCACCGGG CGAATATCCT GAACTGCTCC TTCACCGAGA TCGGGGTCGG CGTCGCGAGT AGCAACGGAC CGTACTGGAC ACAGGTCTTC GCCACGCCTC GCTGA
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Protein sequence | MEPDDNRRRP EPAADGWDRP ADEWDRRQQT AHRRAESETP QGWAAAGSSY HDQPSRGGQA APTWQHTDGW QQESAGGWRR QPTGWRDEPS GGGRHAAGAT GGPEVTGGWR PEETATRPTA GYEDDMTSMR PVAGAAPADA TSANKGPRVG HRNRRPVLIG AAAAATLVVS LGAGAAALSD GGDTVPTSAL KDIVATNPTS YEGGVTSSSS SPSTAWSNAS QSRSENARRK SAASSRHSTR SRFDQERHRG SYRSKPSHTT TAPSPTRVPT TAPSPTRVPT TAPSPTQVPT TAPSPTQVPT TAPSPTQVPT TAPSDGGVST EASEVVRLVN AERAKAGCAA LSIDEKLMTA AQRHSQDQAD QQKMSHTGSN GSSPGDRITA VGYQWRTYGE NVAWNQQSPE AVMTAWMNSP GHRANILNCS FTEIGVGVAS SNGPYWTQVF ATPR
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