Gene Strop_4188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4188 
Symbol 
ID5060672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4755687 
End bp4756196 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content68% 
IMG OID640476449 
Producthypothetical protein 
Protein accessionYP_001160994 
Protein GI145596697 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.499034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTATGG ACGTCCTCCG CGACGAGTCC GGTGTCTCCC TCAGGCGCCT CTACCAGCTG 
TTCCCCTCCA AGGAGACCCT CGTCGAAGCC GTCCTGCACC GCCGTCGTCA GATCTGGAAC
ACCTGGGTCG ACGACGCTGT CGCCGCCGGA GGGGGCACGC CCCGCGGACA ACTCCTGGCC
ATCTACGACA TGCTCGCCCG CTGGTCCACC GAAGACGGCT TCCGAGGCTG CATCTTCGTC
AACGCTTTCA GCGAACTCGG CGGCACCACA CCCCACATCG CCGCCCTCGT CCGCGACCAG
AAAGTCCAGT TTCAGCAACG CTTGGCCGGC ATCGTCGCCG CCACGGGCGC ACCCGCAGCC
CTCGCCGACC AACTCGCCGT CCTCGCCGAA GGGGCACAAA CCACCGCCGC CATCACCGGC
ACCCCCGACC CCATCCAGCA TGCCCGCACC GCCGCCACCA CCCTCATCGA CACCGCCCTA
GCTGTCGGCA AGCCCGGCAA GAAAGCGTGA
 
Protein sequence
MGMDVLRDES GVSLRRLYQL FPSKETLVEA VLHRRRQIWN TWVDDAVAAG GGTPRGQLLA 
IYDMLARWST EDGFRGCIFV NAFSELGGTT PHIAALVRDQ KVQFQQRLAG IVAATGAPAA
LADQLAVLAE GAQTTAAITG TPDPIQHART AATTLIDTAL AVGKPGKKA