Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4131 |
Symbol | |
ID | 5060615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4696958 |
End bp | 4698163 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640476393 |
Product | histidine kinase, dimerisation and phosphoacceptor region |
Protein accession | YP_001160938 |
Protein GI | 145596641 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.771261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATGCGG CGCCGAACGT CCTCCTCACC AGGCCCGGAT CGTTGCAGCT GGTCACCCCG CTGATCTTCG TCTCGTGGCT GTTGACGGCA TACCCGTGGG CCTGGTTCCT GACTAGCCCG CCCGAGGAAC GCTGGTCGTC GCTGTTCCCG CCGGGCGTCC TCGCCACCAC CGCGGCCCGG GTAGCTCTGC TGGTGGCCGC CGCCGCGGCG CTGGCCGGCA GCATCCGGTT GCGCCGGTTA CCCCTGCCCG CCTTCGGGCT GCTACTGGCC AGCATCGCGA TCCCCACCCT AGCGTGGCAG CAGCCGGAGA TCTGGGCGTT GCAGATCCTC CCGATCGACT TCGCCCTGGT GGCCATCACG CTGTACTCCG CACCCCGGGT GACGCTGACC GCGACCAGCC TGGCCCTGGG CCTGCTCGCC GTCTGTCTGA TCACACGCTT GGTGGTGCAT GGGGAAGGCG GCACCCCGTC GGAACCGGGC ATGGCGCTCA CCGTGGGCAT GGCCGTCCTC ATCGGAACGG TGATCCGGCA GCGACGGGCC CAGGCCGCGG CCGCGCGCAG ACAGGCCTCC GCCGAGGTGG TCAGCGCCGA ACGGCTCCGG ATCGCCCGCG ATCTTCACGA CATGGTGGCG CACAGCCTTG GCGTCATCGC GCTGCAGGCC GGTGCGGCGG GCCGCGTCAT GCATACGCAA CCGGAAGCCG CCCGGGAAGC GATCCACAAC ATCGAGAAGG TCGGCCAGGA GACCCTGTCC GGCCTACGCC GGGTCGTCTC CTCGCTGCGC AACGTCGACC CCGACCGGCC GGACTCCCCC ACGGCGGCGC CCTCGCTCGC CACCCTCGAC GAGCTCATCG CCACCACCCG GGCGGCCGGC GTGGACATCG ACGTGAGCCG GCAGGGCGAG CCGCGGGCCC TGCCCATGGA GATCGACGCC GCCGCATATC GCATCGTTCA AGAGGCTGTG GCCAACGTGA TCCGACATGC CGAGACCGAC GCCTGCCGGA TCCTGATCAG TTCCCGCGAA GGCGAGTTGT TCGTGGAGGT GGTCGACGAC GGAGCCGGTC GCGGCCGGCG GCCTGGGGCC GGGTTCGGAC TGGCCGGCAT GCGGGAGCGG GTCGAGATGC TGCACGGCAC GATCGTCACT GGCCCACGTC CGGAGGGCGG CTTCCGGGTG GCGGCCCACC TACCCCTCCC GACGGACGAC CGATGA
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Protein sequence | MHAAPNVLLT RPGSLQLVTP LIFVSWLLTA YPWAWFLTSP PEERWSSLFP PGVLATTAAR VALLVAAAAA LAGSIRLRRL PLPAFGLLLA SIAIPTLAWQ QPEIWALQIL PIDFALVAIT LYSAPRVTLT ATSLALGLLA VCLITRLVVH GEGGTPSEPG MALTVGMAVL IGTVIRQRRA QAAAARRQAS AEVVSAERLR IARDLHDMVA HSLGVIALQA GAAGRVMHTQ PEAAREAIHN IEKVGQETLS GLRRVVSSLR NVDPDRPDSP TAAPSLATLD ELIATTRAAG VDIDVSRQGE PRALPMEIDA AAYRIVQEAV ANVIRHAETD ACRILISSRE GELFVEVVDD GAGRGRRPGA GFGLAGMRER VEMLHGTIVT GPRPEGGFRV AAHLPLPTDD R
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