Gene Strop_4091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4091 
Symbol 
ID5060573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4651874 
End bp4652146 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content70% 
IMG OID640476352 
ProductDNA binding domain-containing protein 
Protein accessionYP_001160899 
Protein GI145596602 
COG category[L] Replication, recombination and repair 
COG ID[COG2452] Predicted site-specific integrase-resolvase 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.446784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACTG GAGATCGCCT GCTGACACCG GGTGAGGTCG CCGCGCTGTT TCGGGTTGAT 
CCGAAGACTG TGACCAGGTG GGCGGCGGCT GGCCGGATTG GCAGCATCCG AACTCCGGGC
GGGCATCGCC GATTTCGGGA ATCCGAAGTT CGGGCCCTGC TCGAGGGCGA GGGGATGTTG
GACGAGGCGG AGGAGACAGA GCGGCCGCGC AACACCGGCC CTGCCGCCCC GACCGGCCCC
GGCCCCGGCC CCGCCAACGC CGGAATGTAT TGA
 
Protein sequence
MDTGDRLLTP GEVAALFRVD PKTVTRWAAA GRIGSIRTPG GHRRFRESEV RALLEGEGML 
DEAEETERPR NTGPAAPTGP GPGPANAGMY