| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4086 |
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| Symbol | |
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| ID | 5060568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4645628 |
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| End bp | 4647181 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640476347 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_001160894 |
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| Protein GI | 145596597 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.296945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGACA GTGACCACGG ACGGCGACCT CGACGAAGCC CGGTGATCTC GCCGGTGCTC
CGCCCGAAAC TCTGGTCCGC GTTGCTGGGC ATCATCGCCG CCGGCGCGCT CAGCGCGCCG
GTCTACGCCG ATCCGCCGCT GCCCGACACC GTGCCCGACA GCGGCGCCCG CCCGGTCCTG
TCCGGGCCGC TGAGCCTGCC CGGCGGTGGA CCGCTCACCC CGTCTCCCTC AACACCGGTC
GACAACCTCA TCAACGGACC GCTCGCCACC CAGATCTACG CGGCCGAGGC CCGCATCGGC
CAACTGAGCG ACGAACTACT CCTGCTGAGG CAACAGCGGA CCGAGGCGGA GACGCAGCTC
ATCGCCGCCG AGCAGGAGCT GAACCTGGCC CTGACAGCGC TGGCCGAGGC CCAGTCGCGG
GCGGATTCCG CGGTCGCCGA CGCGATCAAG GCGGCTGCGG CGTTGCCACC CGCGCCCTTC
GCCGACGATC TCCAGGATCT GAGCGAGCTC TCCGGCCTCG CCCGGGGAGA GGACGTCGCC
GGCGGGGAGA CCACCGCGGC GACCCGGCAG CTCAACCGGG CCCGCGCCGA CGAGCAGGTC
GCGCAGCAGG CGATGACGGC GGCGCAGTCC CGGGTACGCT CCGTCGACAC CGCCTACACC
AGCACCGAGC AGGCGCTGCG CAGCGAGGAG GCGAAGCTCG CCTCCCTCAG GGAGGACAAG
GCCGCCCAAC TGCTGGAGCT GGAACGTCAG CAGGAGGCGG CGGAGCAGGC GCTCGGCGCG
CAGTGGGTCG CCGACGAGAC GGCGAACGGG CTCGTCGCGC ACCCCATCGC CCGCGCGGCG
GTCACCTATG CGATGGACCA GCTCGGCGAT CCGTACCTCT GGGCGGCCGA GGGGCCGGAC
CGATTCGACT GCTCGGGCCT GATCTGGGCC GCCTACCGCT CGGCCGACTA CCGCAACCTG
CCCCGGGTCT CCCGCGACCA GTACTACGCG ACCCGGCACC GCACCGTCCC CCGTACTGGC
CTGCTCCCCG GTGACCTTCT CTTCTTCGCC TCCGGGTCGA GCTGGACCAG CATCCACCAC
ATCGGCATGT ACATCGGCGG CGGGCGGATG ATCCACGCCC CGAGCAGCGG CGACGTGGTC
AAGATCTCAA CTGTGACCTG GTCGCGTCTC TACGCGGCGA CGCGAGTGGT CGGTGGAGTC
CCTGCACCGC CCACGCCCAC GCCCACACCC ACCGCCTCGG CCACCCCGAA GCCGACATCG
CCCCCGTCGG CATCACCGTC CCCCTCGGCC ACAAGCACCC CCTCGCCATC GACGTCTCCG
ACCAGCACCC CGTCTCCCAC AACCAGCCCG ACCAACACCC CATCCCCCAC CACCTCACCC
TCACCGCCTC CAACCAGCAC CCCGTCTCCC ACAACCAGCC CGACCAACAC CCCATCCCCC
ACCACCTCAC CCTCGGCAGC TCCGACCAGC ACCCCGCCGC CCACCACCTC GTCCTCGACG
ACCCCGACCG GGATCCCGTC GCCCTCGACA ACCGGCGGCT CATTCCTGCC GTAG
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| Protein sequence | MGDSDHGRRP RRSPVISPVL RPKLWSALLG IIAAGALSAP VYADPPLPDT VPDSGARPVL
SGPLSLPGGG PLTPSPSTPV DNLINGPLAT QIYAAEARIG QLSDELLLLR QQRTEAETQL
IAAEQELNLA LTALAEAQSR ADSAVADAIK AAAALPPAPF ADDLQDLSEL SGLARGEDVA
GGETTAATRQ LNRARADEQV AQQAMTAAQS RVRSVDTAYT STEQALRSEE AKLASLREDK
AAQLLELERQ QEAAEQALGA QWVADETANG LVAHPIARAA VTYAMDQLGD PYLWAAEGPD
RFDCSGLIWA AYRSADYRNL PRVSRDQYYA TRHRTVPRTG LLPGDLLFFA SGSSWTSIHH
IGMYIGGGRM IHAPSSGDVV KISTVTWSRL YAATRVVGGV PAPPTPTPTP TASATPKPTS
PPSASPSPSA TSTPSPSTSP TSTPSPTTSP TNTPSPTTSP SPPPTSTPSP TTSPTNTPSP
TTSPSAAPTS TPPPTTSSST TPTGIPSPST TGGSFLP
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