Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4072 |
Symbol | paaB |
ID | 5060554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4630222 |
End bp | 4630542 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640476333 |
Product | phenylacetate-CoA oxygenase subunit PaaB |
Protein accession | YP_001160880 |
Protein GI | 145596583 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3460] Uncharacterized enzyme of phenylacetate metabolism |
TIGRFAM ID | [TIGR02157] phenylacetate-CoA oxygenase, PaaH subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.733773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.10942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAGT ACAGCGAGCC GACCGGCCAG CCCGGCGGGG CTCCTCCGGC GCCGCTCTGG GAGGTCTTCG TCCGGGCCCG GCGAGGTCTG GCGCACACCC ACGTCGGCAG CCTGCACGCG GCCGACGCCG AGCTGGCCCT GCACAACGCC CGGGACCTCT ACACCCGGAG ACAGGAGGGG GTGTCGATCT GGGTGCTGCC GGCCGCCGCC ATCACCGCGT CGAGCCCGGA CGAGAAGGAC GCCTTCTTCG ACCCGGCGGC CGACAAGGTC TACCGGCACC CGACCTTCTA CGAGGTGCCG GAGGGGGCTG CTCACCTGTG A
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Protein sequence | MSEYSEPTGQ PGGAPPAPLW EVFVRARRGL AHTHVGSLHA ADAELALHNA RDLYTRRQEG VSIWVLPAAA ITASSPDEKD AFFDPAADKV YRHPTFYEVP EGAAHL
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