Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4033 |
Symbol | |
ID | 5060515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4585050 |
End bp | 4587458 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640476294 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001160841 |
Protein GI | 145596544 |
COG category | [R] General function prediction only |
COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.338213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTCCG ACAGCCCGGC GCCCCGGCCG CGGCGCCCCG GCCGGCCGCC GTCACCCACG GCCACCCGCG CCGCAGCCCC CGGGCCGTCC CCGACAGAGC TGCTGGGCCA GCTACGCGCC CGGCATGACG CCGACCCGGT AACCCACGTC GAACGGGTAC CCGCCCGCGC CGGCGAGCCC GCGCCGTGGC CCAGCTGGGT CCCGGCGGAT CTGCACGCGG CGTTCACCCG GCAGGGCGTG GAGACACCGT GGCAGCACCA GGCCGAAGCC GCCGATCTCG CCCACACCGG CAGCCACGTC GTCGTCGCCA CCGGCACGGC ATCCGGCAAG TCCCTGGCCT ACCAGCTCCC GGCGCTGTCA ACGCTGCTCA CCGACCCCCG CGCCACCGTG CTCTACCTCG CTCCCACCAA AGCACTCGCT GTTGACCAGC TACGGGCCAT CACCGAGCTG GAGCTGGACG GAGTACGCCC CGCCTGCTAC GACGGAGACA CCCCCCGGGC CGAACGGGAA TGGATCCGGC AGCACGCGCG GTTCGTGCTG ACCAACCCCG ACATGCTCCA CCACGGCATC CTGCCCGGCC ATGCCCAGTG GACGAGGTTC CTCCGCCGGC TCGCGTACGT GGTGGTGGAC GAGTGCCACA GCTACCGGGG CGTCTTCGGC TCGCAGGTGG CGCACGTGCT GCGCCGACTG CGCCGGCAGT GCACTCGGAT CGGCCGTACG CCGGTCTTCG TGCTGGCCTC CGCCACCTCG GGTGACCCGG CCGTGACGGC CGAACGACTC ACCGGCCTGC CCGTGGCGGC GGTCACCGGA GACACCTCGC CCCGCGGCGG GGTGACCTTC GCGCTGTGGG AGCCGCCGAC GCTGCCCACC CCGACCACCT CCCCCGACGA CACCGACCTC GCGCCGGTAC GTCGATCCGC GCTGCGAGAA ACCGCCGACC TGCTCGCCGA CGCGGTGGCC GCGGGGGTCC GCACGCTCGC CTTCGTCCGG TCCCGACGGG GGGCCGAGGC GGTGGCCGCC AACGCCCGCC GGGCCCTCGA CGAGGCGGTA TCCGGGCTGG GTAACCAGGT GGCCGCCTAC CGCGCCGGCT ACCTGCGCGA GGAGCGACGC GAACTGGAAC GGTCCCTCCT CAGCGGTGAG CTGCGCGGAC TCGCCTCAAC CAACGCCCTC GAACTCGGCG TCGACCTGGT CGGGCTGGAC GCGGTGCTGA TCTGCGGCTA CCCCGGCACC CGCGCCTCGC TCTGGCAGCA GGCCGGGCGG GCCGGACGCT CCGGCCAGGA GGCGCTGGCG GTGCTGGTCG CCCGGGACGA TCCGCTCGAC AGCTACCTCG TCCACCACCC CGAGGCGGTC TTCGGGGCAC CGGTCGAGGC GACCGTGCTC GACCCCACCA ATCCGTACGT GCTCGGGCCG CAGCTCGCCT GCGCCGCCGC CGAGGCACCA CTCACCCCGG CCGACCTGGA CCTGTTCGGG GACGGCGCGA AAGAGGCGGT GGACGCTCTG GTCGAGGCCG GTGCGCTCCG ACAGCGCCCC ACCGGGTGGT ACTGGCGCCA CCGCGAGCGC CCCCAGGTGG AGCTACGCGG CGGAGACGGC GCACCGATCT GCGTGGTGGA GACGGCGACC GGGCGGCTGC TCGGCACGGT CGACGGCGGG TCGTCGCACT TCCTGCTGCA TCCCGGGGCG GTCTACCTGC ACCAGGGCGT CTCGTACGTG GTCGACACCC TCGACCTCGC CGACGGGTGC GCGCTGGTGC ACCCCGAGGA GCCGGACTGG TCCACCCATG CCCGCGATGT CACGTCGCTG TCGGTGGTGG CGGTCCGGTC GTACGTGGAC GCCGGACCGG TCGGGCTCTT TCTCGGTGAG GTCGACGTGA CCAGCCAGGT GGTGTCCTAC CAGCGACGCC GAATTGCCAC CGGCGAGGTC ATCGACACCC GCCCCCTGGA CCTACCCGCC CGGGAGCTGC GAACCGTGGC GGTGTGGTTC ACGCTCTCGC CGGAGTCCCT CACCGCGAGT GGAGTCGACC CGGCCGACGT GCCGGGCGCG CTGCACGCCG CCGAGCACGC CGCGATCGGG TTGCTGCCGC TGACCGCCAC CTGCGACCGG TGGGACATCG GCGGCTTGTC AACCGCGATG CATCCCGACA CCGGGGCACC GACCGTCTTC GTCTACGACG GCCACTCCGG CGGGGCCGGC TTCGCCGAGC GGGCGTATGC AACGGCGGCG ACATGGCTCC GGGCTACCCG GGATGTGGTC ACGGACTGTG GCTGCGAGTT CGGCTGCCCG TCCTGCGTCC AGTCCCCGAA GTGCGGCAAC GGCAACAATC CACTGTCCAA GCCGGACGCG GTCCGGGTCC TCGACGTCGT ACTGGCCAAC CTGCCATCCG GAACGGTTCA GGCCAGCCGG GCGTCCTGA
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Protein sequence | MTSDSPAPRP RRPGRPPSPT ATRAAAPGPS PTELLGQLRA RHDADPVTHV ERVPARAGEP APWPSWVPAD LHAAFTRQGV ETPWQHQAEA ADLAHTGSHV VVATGTASGK SLAYQLPALS TLLTDPRATV LYLAPTKALA VDQLRAITEL ELDGVRPACY DGDTPRAERE WIRQHARFVL TNPDMLHHGI LPGHAQWTRF LRRLAYVVVD ECHSYRGVFG SQVAHVLRRL RRQCTRIGRT PVFVLASATS GDPAVTAERL TGLPVAAVTG DTSPRGGVTF ALWEPPTLPT PTTSPDDTDL APVRRSALRE TADLLADAVA AGVRTLAFVR SRRGAEAVAA NARRALDEAV SGLGNQVAAY RAGYLREERR ELERSLLSGE LRGLASTNAL ELGVDLVGLD AVLICGYPGT RASLWQQAGR AGRSGQEALA VLVARDDPLD SYLVHHPEAV FGAPVEATVL DPTNPYVLGP QLACAAAEAP LTPADLDLFG DGAKEAVDAL VEAGALRQRP TGWYWRHRER PQVELRGGDG APICVVETAT GRLLGTVDGG SSHFLLHPGA VYLHQGVSYV VDTLDLADGC ALVHPEEPDW STHARDVTSL SVVAVRSYVD AGPVGLFLGE VDVTSQVVSY QRRRIATGEV IDTRPLDLPA RELRTVAVWF TLSPESLTAS GVDPADVPGA LHAAEHAAIG LLPLTATCDR WDIGGLSTAM HPDTGAPTVF VYDGHSGGAG FAERAYATAA TWLRATRDVV TDCGCEFGCP SCVQSPKCGN GNNPLSKPDA VRVLDVVLAN LPSGTVQASR AS
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