| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3980 |
|---|
| Symbol | |
|---|
| ID | 5060461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4531682 |
|---|
| End bp | 4532299 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640476240 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
|---|
| Protein accession | YP_001160788 |
|---|
| Protein GI | 145596491 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGTAG ACATCACCAT GCACGAGGAG TTGCGGGAGC TACTGGGCGT ACCGACGGCC
CAGGCCGCCA CGAAGGAACG GACCCACCTG CACGAGCGGG ACCGGCAGTG GCTTGCCGCC
TCCCCGTTCT GCCTGGTCGC CACGGCCGGC GCGGACGGCA CCTGCGACGT CTCACCGAAG
GGGGACCCGC CCGGATTCGC CCTGCCGATC GACGACACCA CCATCGCCAT CCCGGAGCGA
CCCGGCAACA GACGGGCCGA CGGCTTCCAC AACATCCTGG ACAACCCACA CGTCGGGCTG
ATCTTCCTGA TTCCCGGGCG CACCGACACG TTGCGGATCA ACGGTCGGGC CCGACTGGTC
CGGGAGGCGC CCTTCTTCGA CTCGATGACG GTCAAGGGCC ACCGGCCGAT CCTGGCCCTG
GTGGTAGCGA TCGAGGAGAT CTTCTACCAC TGCGCGAAGG CATTCCTCCG GTCGCAGCTG
TGGAGCCCGC AGACCTGGAC GCCCGAGGTT CTGCCGTCGC GGGCCCGCCT GGCCAAGGAG
GTCGAGGTCC GCGCGGAGAG CCTGGCCGAC CTACAGAGTT ACTACGGCCC GGAGTACGCC
CGCCGCCTCT ACACCTGA
|
|---|
| Protein sequence | MTVDITMHEE LRELLGVPTA QAATKERTHL HERDRQWLAA SPFCLVATAG ADGTCDVSPK
GDPPGFALPI DDTTIAIPER PGNRRADGFH NILDNPHVGL IFLIPGRTDT LRINGRARLV
REAPFFDSMT VKGHRPILAL VVAIEEIFYH CAKAFLRSQL WSPQTWTPEV LPSRARLAKE
VEVRAESLAD LQSYYGPEYA RRLYT
|
|---|
| |